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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182419422
OIGK01000025
281593
Bacillota
CAT
Met
>WENV182419518
OIGK01000635
99852
Bacillota
GTA
Tyr
>WENV182419517
OIGK01000635
405363
Bacillota
GCA
Cys
>WENV182419482
OIGK01000184
280428
Bacillota
GAA
Phe
>WENV182419616
OIGK01008400
291579
Bacillota
GAA
Phe
>WENV182419615
OIGK01008400
179917
Bacillota
CAT
Met
>WENV182419651
OIGK01012723
280492
Bacillota
CTT
Lys
>WENV182419503
OIGK01000329
175842
Bacillota
CAC
Val
>WENV182419606
OIGK01006353
184687
Bacillota
CAT
Met
>WENV182419573
OIGK01003419
190476
Bacillota
CAT
Met
>WENV182419493
OIGK01000201
5692
Bacillota
GCT
Ser
>WENV182419625
OIGK01009572
175825
Bacillota
GAT
Ile
>WENV182419502
OIGK01000293
73009
Bacillota
CAG
Leu
>WENV182419532
OIGK01001167
73009
Bacillota
CAG
Leu
>WENV182419507
OIGK01000400
175859
Bacillota
TCT
Arg
>WENV182419624
OIGK01009572
280436
Bacillota
TGC
Ala
>WENV182419639
OIGK01011369
175831
Bacillota
ACG
Arg
>WENV182419535
OIGK01001231
480322
Bacillota
CTG
Gln
>WENV182419555
OIGK01001917
175868
Bacillota
GTT
Asn
>WENV182419554
OIGK01001917
398854
Bacillota
CTC
Glu
>WENV182419550
OIGK01001862
291576
Bacillota
CCC
Gly
>WENV182419504
OIGK01000361
480324
Bacillota
TTG
Gln
>WENV182419633
OIGK01010584
56079
Bacillota
AAG
Leu
>WENV182419559
OIGK01002123
186051
Bacillota
GAT
Ile
>WENV182419596
OIGK01005071
398857
Bacillota
TTC
Glu
>WENV182419614
OIGK01008140
117745
Bacillota
GTA
Tyr
>WENV182419514
OIGK01000487
280444
Bacillota
GGT
Thr
>WENV182419579
OIGK01003869
291597
Bacillota
TGC
Ala
>WENV182419484
OIGK01000190
179755
Bacillota
CCG
Arg
>WENV182419574
OIGK01003419
398832
Bacillota
TTC
Glu
>WENV182419599
OIGK01005071
175915
Bacillota
GTC
Asp
>WENV182419622
OIGK01009272
175857
Bacillota
GTG
His
>WENV182419512
OIGK01000433
398833
Bacillota
TGT
Thr
>WENV182419492
OIGK01000201
56074
Bacillota
TGA
Ser
>WENV182419586
OIGK01004037
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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