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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182421563
OIGT01000131
190476
Bacillota
CAT
Met
>WENV182421564
OIGT01000131
398832
Bacillota
TTC
Glu
>WENV182421569
OIGT01000164
179755
Bacillota
CCG
Arg
>WENV182421571
OIGT01000181
280444
Bacillota
GGT
Thr
>WENV182421582
OIGT01000430
483485
Bacillota
CCC
Gly
>WENV182421583
OIGT01000634
480324
Bacillota
TTG
Gln
>WENV182421589
OIGT01000862
82124
Bacillota
TAA
Leu
>WENV182421591
OIGT01000871
73009
Bacillota
CAG
Leu
>WENV182421594
OIGT01000924
398833
Bacillota
TGT
Thr
>WENV182421595
OIGT01000960
73009
Bacillota
CAG
Leu
>WENV182421616
OIGT01001891
56074
Bacillota
TGA
Ser
>WENV182421617
OIGT01001891
5692
Bacillota
GCT
Ser
>WENV182421618
OIGT01001920
175831
Bacillota
ACG
Arg
>WENV182421631
OIGT01002717
291579
Bacillota
GAA
Phe
>WENV182421633
OIGT01002717
229015
Bacillota
GTG
His
>WENV182421635
OIGT01002717
280476
Bacillota
TTT
Lys
>WENV182421649
OIGT01003126
339995
Bacillota
TGC
Ala
>WENV182421657
OIGT01003827
280473
Bacillota
TGG
Pro
>WENV182421685
OIGT01006033
480322
Bacillota
CTG
Gln
>WENV182421694
OIGT01007285
280428
Bacillota
GAA
Phe
>WENV182421708
OIGT01009176
46835
Bacillota
TAA
Leu
>WENV182421715
OIGT01010225
280486
Bacillota
TGC
Ala
>WENV182421719
OIGT01011030
291581
Bacillota
CGG
Pro
>WENV182421720
OIGT01011100
175859
Bacillota
TCT
Arg
>WENV182421722
OIGT01011959
175842
Bacillota
CAC
Val
>WENV182421738
OIGT01014378
179176
Bacillota
ACG
Arg
>WENV182421748
OIGT01015276
398857
Bacillota
TTC
Glu
>WENV182421750
OIGT01015507
187364
Bacillota
CAT
Met
>WENV182421754
OIGT01016490
290391
Bacillota
TAC
Val
>WENV182421755
OIGT01016490
285556
Bacillota
TGT
Thr
>WENV182421762
OIGT01019330
201856
Bacillota
GAT
Ile
>WENV182421763
OIGT01019330
292374
Bacillota
TGC
Ala
>WENV182421772
OIGT01022400
497729
Bacillota
CCA
Trp
>WENV182421782
OIGT01025248
20942
Bacillota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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