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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182424620
OIHG01000040
245386
Bacillota
CCA
Trp
>WENV182424661
OIHG01000282
411549
Bacillota
TTG
Gln
>WENV182424668
OIHG01000332
58712
Bacillota
CAG
Leu
>WENV182424672
OIHG01000351
338129
Bacillota
TGT
Thr
>WENV182424676
OIHG01000386
235171
Bacillota
CCA
Trp
>WENV182424678
OIHG01000386
235095
Bacillota
GGT
Thr
>WENV182424679
OIHG01000446
144621
Bacillota
GTT
Asn
>WENV182424680
OIHG01000464
338149
Bacillota
CTC
Glu
>WENV182424681
OIHG01000464
272992
Bacillota
CTT
Lys
>WENV182424687
OIHG01000479
144612
Bacillota
TCT
Arg
>WENV182424694
OIHG01000566
235124
Bacillota
TGG
Pro
>WENV182424698
OIHG01000636
411547
Bacillota
CTG
Gln
>WENV182424701
OIHG01000699
238974
Bacillota
GAA
Phe
>WENV182424703
OIHG01000718
144583
Bacillota
ACG
Arg
>WENV182424704
OIHG01000751
235095
Bacillota
GGT
Thr
>WENV182424707
OIHG01000776
44854
Bacillota
TGA
Ser
>WENV182424708
OIHG01000776
4624
Bacillota
GCT
Ser
>WENV182424711
OIHG01000847
11034
Bacillota
GGA
Ser
>WENV182424723
OIHG01001093
144594
Bacillota
CAC
Val
>WENV182424726
OIHG01001232
273862
Bacillota
TGC
Ala
>WENV182424735
OIHG01001454
267556
Bacillota
TAC
Val
>WENV182424742
OIHG01001685
245296
Bacillota
CCC
Gly
>WENV182424747
OIHG01002081
100326
Bacillota
GTA
Tyr
>WENV182424763
OIHG01002982
338147
Bacillota
CTC
Glu
>WENV182424774
OIHG01003703
272488
Bacillota
GAA
Phe
>WENV182424790
OIHG01005337
238910
Bacillota
CTT
Lys
>WENV182424800
OIHG01006059
148239
Bacillota
TCT
Arg
>WENV182424801
OIHG01006059
144610
Bacillota
GTG
His
>WENV182424803
OIHG01006059
114075
Bacillota
TAG
Leu
>WENV182424812
OIHG01006829
148188
Bacillota
CCG
Arg
>WENV182424823
OIHG01007519
272488
Bacillota
GAA
Phe
>WENV182424832
OIHG01009535
247734
Bacillota
TGC
Ala
>WENV182424846
OIHG01011404
238945
Bacillota
GCC
Gly
>WENV182424862
OIHG01017191
114075
Bacillota
TAG
Leu
>WENV182424893
OIHG01028080
235142
Bacillota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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