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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182425000
OIHI01000485
175831
Bacillota
ACG
Arg
>WENV182424998
OIHI01000439
175842
Bacillota
CAC
Val
>WENV182425028
OIHI01001268
73009
Bacillota
CAG
Leu
>WENV182425065
OIHI01005311
179917
Bacillota
CAT
Met
>WENV182425018
OIHI01000817
190476
Bacillota
CAT
Met
>WENV182425058
OIHI01004170
184495
Bacillota
CAT
Met
>WENV182425031
OIHI01001348
291576
Bacillota
CCC
Gly
>WENV182425021
OIHI01000922
179755
Bacillota
CCG
Arg
>WENV182425080
OIHI01006583
291581
Bacillota
CGG
Pro
>WENV182425029
OIHI01001327
398854
Bacillota
CTC
Glu
>WENV182425079
OIHI01006583
480322
Bacillota
CTG
Gln
>WENV182425086
OIHI01007963
291553
Bacillota
GAA
Phe
>WENV182425088
OIHI01008548
280447
Bacillota
GAC
Val
>WENV182425084
OIHI01007463
186051
Bacillota
GAT
Ile
>WENV182425075
OIHI01006241
405363
Bacillota
GCA
Cys
>WENV182425001
OIHI01000485
349107
Bacillota
GCC
Gly
>WENV182425016
OIHI01000762
5692
Bacillota
GCT
Ser
>WENV182425057
OIHI01004170
296855
Bacillota
GGT
Thr
>WENV182425012
OIHI01000695
280444
Bacillota
GGT
Thr
>WENV182425023
OIHI01000976
99852
Bacillota
GTA
Tyr
>WENV182425085
OIHI01007963
280547
Bacillota
GTC
Asp
>WENV182425011
OIHI01000695
175849
Bacillota
GTC
Asp
>WENV182425027
OIHI01001148
175868
Bacillota
GTT
Asn
>WENV182425068
OIHI01005311
228119
Bacillota
TCT
Arg
>WENV182425060
OIHI01004642
175859
Bacillota
TCT
Arg
>WENV182425015
OIHI01000762
56074
Bacillota
TGA
Ser
>WENV182425005
OIHI01000649
291597
Bacillota
TGC
Ala
>WENV182425042
OIHI01002170
280473
Bacillota
TGG
Pro
>WENV182425073
OIHI01005939
398833
Bacillota
TGT
Thr
>WENV182425054
OIHI01003424
480324
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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