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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182426912
OIHS01000264
24650
Bacillota
TAA
Leu
>WENV182426932
OIHS01001138
16842
Bacillota
CGA
Ser
>WENV182426972
OIHS01005593
37213
Bacillota
TGA
Ser
>WENV182426900
OIHS01000180
144612
Bacillota
TCT
Arg
>WENV182426820
OIHS01000013
235098
Bacillota
GAC
Val
>WENV182426903
OIHS01000185
235098
Bacillota
GAC
Val
>WENV182426828
OIHS01000023
44854
Bacillota
TGA
Ser
>WENV182426910
OIHS01000264
144668
Bacillota
GTC
Asp
>WENV182426857
OIHS01000064
182792
Bacillota
GTC
Asp
>WENV182426831
OIHS01000025
11034
Bacillota
GGA
Ser
>WENV182426996
OIHS01009637
37437
Bacillota
TAA
Leu
>WENV182426832
OIHS01000025
235079
Bacillota
GAA
Phe
>WENV182426825
OIHS01000023
338149
Bacillota
CTC
Glu
>WENV182426868
OIHS01000084
245298
Bacillota
CGG
Pro
>WENV182426940
OIHS01001643
147135
Bacillota
ACG
Arg
>WENV182426867
OIHS01000084
411547
Bacillota
CTG
Gln
>WENV182426799
OIHS01000002
411547
Bacillota
CTG
Gln
>WENV182426829
OIHS01000023
4624
Bacillota
GCT
Ser
>WENV182426926
OIHS01000712
18852
Bacillota
GCT
Ser
>WENV182426858
OIHS01000064
235095
Bacillota
GGT
Thr
>WENV182426855
OIHS01000064
235095
Bacillota
GGT
Thr
>WENV182426956
OIHS01003416
194150
Bacillota
TGG
Pro
>WENV182426813
OIHS01000008
411549
Bacillota
TTG
Gln
>WENV182426871
OIHS01000092
148188
Bacillota
CCG
Arg
>WENV182426942
OIHS01001728
80612
Bacillota
GTA
Tyr
>WENV182426869
OIHS01000084
235124
Bacillota
TGG
Pro
>WENV182426944
OIHS01001903
243613
Bacillota
GTG
His
>WENV182426865
OIHS01000076
144583
Bacillota
ACG
Arg
>WENV182426856
OIHS01000064
235171
Bacillota
CCA
Trp
>WENV182426826
OIHS01000023
144621
Bacillota
GTT
Asn
>WENV182426823
OIHS01000015
144621
Bacillota
GTT
Asn
>WENV182426985
OIHS01007326
152491
Bacillota
CAT
Met
>WENV182426888
OIHS01000139
58712
Bacillota
CAG
Leu
>WENV182426845
OIHS01000035
245296
Bacillota
CCC
Gly
>WENV182426981
OIHS01007326
273029
Bacillota
TGT
Thr
>WENV182426984
OIHS01007326
281472
Bacillota
GGT
Thr
>WENV182426819
OIHS01000013
144594
Bacillota
CAC
Val
>WENV182426949
OIHS01002272
413657
Bacillota
CCC
Gly
>WENV182426999
OIHS01010719
272488
Bacillota
GAA
Phe
>WENV182426992
OIHS01008532
238945
Bacillota
GCC
Gly
>WENV182426834
OIHS01000025
249259
Bacillota
GCC
Gly
>WENV182426833
OIHS01000025
249259
Bacillota
GCC
Gly
>WENV182426945
OIHS01001903
343027
Bacillota
TTG
Gln
>WENV182426873
OIHS01000092
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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