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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182428618
OIIA01000299
99852
Bacillota
GTA
Tyr
>WENV182428709
OIIA01006227
405363
Bacillota
GCA
Cys
>WENV182428639
OIIA01001000
184537
Bacillota
ACG
Arg
>WENV182428687
OIIA01002821
290391
Bacillota
TAC
Val
>WENV182428707
OIIA01006227
280428
Bacillota
GAA
Phe
>WENV182428640
OIIA01001017
48505
Bacillota
TGA
Ser
>WENV182428626
OIIA01000538
20932
Bacillota
GCT
Ser
>WENV182428658
OIIA01001698
291553
Bacillota
GAA
Phe
>WENV182428701
OIIA01004783
482593
Bacillota
CCC
Gly
>WENV182428627
OIIA01000592
20942
Bacillota
GGA
Ser
>WENV182428706
OIIA01006099
280447
Bacillota
GAC
Val
>WENV182428698
OIIA01004249
73009
Bacillota
CAG
Leu
>WENV182428719
OIIA01007884
175859
Bacillota
TCT
Arg
>WENV182428628
OIIA01000647
21311
Bacillota
GCT
Ser
>WENV182428633
OIIA01000768
187589
Bacillota
CAT
Met
>WENV182428677
OIIA01002496
289713
Bacillota
TGT
Thr
>WENV182428735
OIIA01012537
480322
Bacillota
CTG
Gln
>WENV182428653
OIIA01001603
175868
Bacillota
GTT
Asn
>WENV182428652
OIIA01001603
398854
Bacillota
CTC
Glu
>WENV182428664
OIIA01001820
497729
Bacillota
CCA
Trp
>WENV182428686
OIIA01002821
180688
Bacillota
GTC
Asp
>WENV182428683
OIIA01002538
432453
Bacillota
TTC
Glu
>WENV182428675
OIIA01002330
480337
Bacillota
TCC
Gly
>WENV182428680
OIIA01002496
280444
Bacillota
GGT
Thr
>WENV182428665
OIIA01001909
119459
Bacillota
TAG
Leu
>WENV182428700
OIIA01004726
179755
Bacillota
CCG
Arg
>WENV182428657
OIIA01001698
280547
Bacillota
GTC
Asp
>WENV182428636
OIIA01000970
46835
Bacillota
TAA
Leu
>WENV182428635
OIIA01000970
175915
Bacillota
GTC
Asp
>WENV182428684
OIIA01002538
289715
Bacillota
TAC
Val
>WENV182428631
OIIA01000768
118359
Bacillota
GTA
Tyr
>WENV182428674
OIIA01002330
208539
Bacillota
TGG
Pro
>WENV182428630
OIIA01000768
321248
Bacillota
TAC
Val
>WENV182428714
OIIA01007302
175849
Bacillota
GTC
Asp
>WENV182428691
OIIA01003495
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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