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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182431668
OIIJ01000181
148188
Bacillota
CCG
Arg
>WENV182431669
OIIJ01000186
58712
Bacillota
CAG
Leu
>WENV182431671
OIIJ01000208
80612
Bacillota
GTA
Tyr
>WENV182431673
OIIJ01000224
338128
Bacillota
TTC
Glu
>WENV182431674
OIIJ01000234
44854
Bacillota
TGA
Ser
>WENV182431675
OIIJ01000234
4624
Bacillota
GCT
Ser
>WENV182431677
OIIJ01000239
338149
Bacillota
CTC
Glu
>WENV182431678
OIIJ01000239
144621
Bacillota
GTT
Asn
>WENV182431684
OIIJ01000318
144612
Bacillota
TCT
Arg
>WENV182431686
OIIJ01000376
411547
Bacillota
CTG
Gln
>WENV182431687
OIIJ01000376
245298
Bacillota
CGG
Pro
>WENV182431688
OIIJ01000381
309417
Bacillota
GGC
Ala
>WENV182431689
OIIJ01000382
235079
Bacillota
GAA
Phe
>WENV182431690
OIIJ01000382
304022
Bacillota
GCC
Gly
>WENV182431691
OIIJ01000383
148188
Bacillota
CCG
Arg
>WENV182431692
OIIJ01000441
245296
Bacillota
CCC
Gly
>WENV182431694
OIIJ01000495
144583
Bacillota
ACG
Arg
>WENV182431705
OIIJ01001041
338129
Bacillota
TGT
Thr
>WENV182431706
OIIJ01001062
235171
Bacillota
CCA
Trp
>WENV182431707
OIIJ01001062
196621
Bacillota
GTC
Asp
>WENV182431708
OIIJ01001062
235095
Bacillota
GGT
Thr
>WENV182431733
OIIJ01002295
144594
Bacillota
CAC
Val
>WENV182431738
OIIJ01002481
155113
Bacillota
CGG
Pro
>WENV182431739
OIIJ01002542
11034
Bacillota
GGA
Ser
>WENV182431740
OIIJ01002814
235124
Bacillota
TGG
Pro
>WENV182431745
OIIJ01003313
144610
Bacillota
GTG
His
>WENV182431748
OIIJ01003447
235137
Bacillota
TGC
Ala
>WENV182431751
OIIJ01003693
307003
Bacillota
TGC
Ala
>WENV182431753
OIIJ01004137
149041
Bacillota
GTC
Asp
>WENV182431759
OIIJ01004849
413152
Bacillota
TCC
Gly
>WENV182431764
OIIJ01005387
235087
Bacillota
TGC
Ala
>WENV182431765
OIIJ01005387
144577
Bacillota
GAT
Ile
>WENV182431784
OIIJ01008087
24650
Bacillota
TAA
Leu
>WENV182431789
OIIJ01008565
235150
Bacillota
TGC
Ala
>WENV182431799
OIIJ01011445
411549
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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