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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182440564
OIKA01000054
338127
Bacillota
TTG
Gln
>WENV182440574
OIKA01000076
338149
Bacillota
CTC
Glu
>WENV182440575
OIKA01000076
235091
Bacillota
CTT
Lys
>WENV182440593
OIKA01000146
148188
Bacillota
CCG
Arg
>WENV182440601
OIKA01000219
148188
Bacillota
CCG
Arg
>WENV182440605
OIKA01000235
235098
Bacillota
GAC
Val
>WENV182440611
OIKA01000275
235124
Bacillota
TGG
Pro
>WENV182440613
OIKA01000329
11034
Bacillota
GGA
Ser
>WENV182440621
OIKA01000441
235098
Bacillota
GAC
Val
>WENV182440627
OIKA01000487
338129
Bacillota
TGT
Thr
>WENV182440633
OIKA01000622
235124
Bacillota
TGG
Pro
>WENV182440635
OIKA01000627
338128
Bacillota
TTC
Glu
>WENV182440645
OIKA01000774
80612
Bacillota
GTA
Tyr
>WENV182440647
OIKA01000780
235095
Bacillota
GGT
Thr
>WENV182440650
OIKA01000897
58712
Bacillota
CAG
Leu
>WENV182440659
OIKA01001214
235079
Bacillota
GAA
Phe
>WENV182440661
OIKA01001269
411547
Bacillota
CTG
Gln
>WENV182440662
OIKA01001269
245298
Bacillota
CGG
Pro
>WENV182440666
OIKA01001327
235124
Bacillota
TGG
Pro
>WENV182440668
OIKA01001441
144594
Bacillota
CAC
Val
>WENV182440676
OIKA01001614
411549
Bacillota
TTG
Gln
>WENV182440686
OIKA01002098
411547
Bacillota
CTG
Gln
>WENV182440687
OIKA01002231
235098
Bacillota
GAC
Val
>WENV182440700
OIKA01002559
245296
Bacillota
CCC
Gly
>WENV182440731
OIKA01004150
153911
Bacillota
GAT
Ile
>WENV182440742
OIKA01005096
235171
Bacillota
CCA
Trp
>WENV182440745
OIKA01005213
235127
Bacillota
TTT
Lys
>WENV182440749
OIKA01006252
338152
Bacillota
TTC
Glu
>WENV182440766
OIKA01008960
144610
Bacillota
GTG
His
>WENV182440767
OIKA01008960
340802
Bacillota
TTG
Gln
>WENV182440776
OIKA01010262
245344
Bacillota
GAA
Phe
>WENV182440799
OIKA01012758
37213
Bacillota
TGA
Ser
>WENV182440819
OIKA01015505
59312
Bacillota
CAG
Leu
>WENV182440823
OIKA01016746
414486
Bacillota
CCC
Gly
>WENV182440828
OIKA01017527
238945
Bacillota
GCC
Gly
>WENV182440829
OIKA01017535
59312
Bacillota
CAG
Leu
>WENV182440835
OIKA01018173
144652
Bacillota
GTC
Asp
>WENV182440841
OIKA01018339
344240
Bacillota
GCC
Gly
>WENV182440850
OIKA01020875
239832
Bacillota
TGT
Thr
>WENV182440852
OIKA01020875
149041
Bacillota
GTC
Asp
>WENV182440859
OIKA01022012
16266
Bacillota
GCT
Ser
>WENV182440867
OIKA01023621
235171
Bacillota
CCA
Trp
>WENV182440869
OIKA01023621
249259
Bacillota
GCC
Gly
>WENV182440884
OIKA01026755
247057
Bacillota
TGC
Ala
>WENV182440900
OIKA01030862
338147
Bacillota
CTC
Glu
>WENV182440902
OIKA01031702
235154
Bacillota
GTT
Asn
>WENV182440904
OIKA01031971
44859
Bacillota
AAG
Leu
>WENV182440907
OIKA01032900
338152
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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