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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182442917
OIKI01000284
59296
Bacillota
AAG
Leu
>WENV182442930
OIKI01000580
236175
Bacillota
CCA
Trp
>WENV182442938
OIKI01000851
338131
Bacillota
GCC
Gly
>WENV182442947
OIKI01001660
235154
Bacillota
GTT
Asn
>WENV182442949
OIKI01001754
16834
Bacillota
GCT
Ser
>WENV182442951
OIKI01001994
37213
Bacillota
TGA
Ser
>WENV182442952
OIKI01001994
10680
Bacillota
GGA
Ser
>WENV182442956
OIKI01002260
243647
Bacillota
TTT
Lys
>WENV182442954
OIKI01002260
243613
Bacillota
GTG
His
>WENV182442955
OIKI01002260
343027
Bacillota
TTG
Gln
>WENV182442960
OIKI01002281
338143
Bacillota
CTC
Glu
>WENV182442964
OIKI01003035
353527
Bacillota
TTC
Glu
>WENV182442971
OIKI01003282
235693
Bacillota
GGT
Thr
>WENV182442972
OIKI01003282
152491
Bacillota
CAT
Met
>WENV182442973
OIKI01003332
114002
Bacillota
CAA
Leu
>WENV182442980
OIKI01003467
243612
Bacillota
TAC
Val
>WENV182442976
OIKI01003467
250349
Bacillota
GAA
Phe
>WENV182442975
OIKI01003467
235197
Bacillota
GTC
Asp
>WENV182442984
OIKI01003550
342895
Bacillota
CAT
Met
>WENV182442999
OIKI01005191
113680
Bacillota
TAG
Leu
>WENV182442998
OIKI01005191
235903
Bacillota
TTT
Lys
>WENV182442995
OIKI01005191
150597
Bacillota
TCT
Arg
>WENV182442994
OIKI01005191
411738
Bacillota
TCC
Gly
>WENV182443002
OIKI01005240
413657
Bacillota
CCC
Gly
>WENV182443006
OIKI01005458
235137
Bacillota
TGC
Ala
>WENV182443013
OIKI01006566
119513
Bacillota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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