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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182456163
OIMW01004754
404076
Bacillota
GCC
Gly
>WENV182456161
OIMW01004754
184504
Bacillota
GTC
Asp
>WENV182456154
OIMW01003146
405357
Bacillota
TTC
Glu
>WENV182456187
OIMW01006593
291579
Bacillota
GAA
Phe
>WENV182456199
OIMW01008790
295166
Bacillota
TGC
Ala
>WENV182456145
OIMW01002383
404079
Bacillota
CAT
Met
>WENV182456141
OIMW01001523
73638
Bacillota
AAG
Leu
>WENV182456173
OIMW01005375
480337
Bacillota
TCC
Gly
>WENV182456129
OIMW01000934
46835
Bacillota
TAA
Leu
>WENV182456182
OIMW01006593
175915
Bacillota
GTC
Asp
>WENV182456177
OIMW01005764
280476
Bacillota
TTT
Lys
>WENV182456184
OIMW01006593
118359
Bacillota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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