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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182456608
OIMZ01001611
56079
Bacillota
AAG
Leu
>WENV182456728
OIMZ01010919
179176
Bacillota
ACG
Arg
>WENV182456535
OIMZ01000320
175831
Bacillota
ACG
Arg
>WENV182456647
OIMZ01003763
175842
Bacillota
CAC
Val
>WENV182456494
OIMZ01000028
73664
Bacillota
CAG
Leu
>WENV182456575
OIMZ01000925
291576
Bacillota
CCC
Gly
>WENV182456595
OIMZ01001328
483485
Bacillota
CCC
Gly
>WENV182456510
OIMZ01000100
179755
Bacillota
CCG
Arg
>WENV182456562
OIMZ01000688
291581
Bacillota
CGG
Pro
>WENV182456563
OIMZ01000692
398854
Bacillota
CTC
Glu
>WENV182456485
OIMZ01000002
398852
Bacillota
CTC
Glu
>WENV182456486
OIMZ01000002
398852
Bacillota
CTC
Glu
>WENV182456512
OIMZ01000144
398852
Bacillota
CTC
Glu
>WENV182456581
OIMZ01001035
398852
Bacillota
CTC
Glu
>WENV182456670
OIMZ01005279
406186
Bacillota
CTC
Glu
>WENV182456561
OIMZ01000688
480322
Bacillota
CTG
Gln
>WENV182456625
OIMZ01002178
480322
Bacillota
CTG
Gln
>WENV182456531
OIMZ01000253
280492
Bacillota
CTT
Lys
>WENV182456527
OIMZ01000244
280428
Bacillota
GAA
Phe
>WENV182456551
OIMZ01000504
280462
Bacillota
GAA
Phe
>WENV182456598
OIMZ01001349
280483
Bacillota
GAA
Phe
>WENV182456514
OIMZ01000154
280447
Bacillota
GAC
Val
>WENV182456617
OIMZ01001891
280447
Bacillota
GAC
Val
>WENV182456665
OIMZ01004719
179563
Bacillota
GAT
Ile
>WENV182456735
OIMZ01011551
186051
Bacillota
GAT
Ile
>WENV182456529
OIMZ01000244
405363
Bacillota
GCA
Cys
>WENV182456753
OIMZ01015516
481217
Bacillota
GCA
Cys
>WENV182456599
OIMZ01001349
285756
Bacillota
GCC
Gly
>WENV182456698
OIMZ01008910
184497
Bacillota
GGG
Pro
>WENV182456582
OIMZ01001057
280444
Bacillota
GGT
Thr
>WENV182456668
OIMZ01005087
99852
Bacillota
GTA
Tyr
>WENV182456554
OIMZ01000509
117745
Bacillota
GTA
Tyr
>WENV182456490
OIMZ01000020
118669
Bacillota
GTA
Tyr
>WENV182456538
OIMZ01000364
175857
Bacillota
GTG
His
>WENV182456564
OIMZ01000692
175868
Bacillota
GTT
Asn
>WENV182456686
OIMZ01007452
46835
Bacillota
TAA
Leu
>WENV182456640
OIMZ01003563
284723
Bacillota
TAC
Val
>WENV182456569
OIMZ01000788
175859
Bacillota
TCT
Arg
>WENV182456749
OIMZ01015225
175859
Bacillota
TCT
Arg
>WENV182456537
OIMZ01000364
179810
Bacillota
TCT
Arg
>WENV182456523
OIMZ01000212
46643
Bacillota
TGA
Ser
>WENV182456636
OIMZ01002937
56074
Bacillota
TGA
Ser
>WENV182456664
OIMZ01004719
295166
Bacillota
TGC
Ala
>WENV182456678
OIMZ01006593
295166
Bacillota
TGC
Ala
>WENV182456588
OIMZ01001106
280473
Bacillota
TGG
Pro
>WENV182456627
OIMZ01002360
398833
Bacillota
TGT
Thr
>WENV182456532
OIMZ01000257
480324
Bacillota
TTG
Gln
>WENV182456651
OIMZ01004063
480324
Bacillota
TTG
Gln
>WENV182456609
OIMZ01001632
309916
Bacillota
TTT
Lys
>WENV182456552
OIMZ01000504
280463
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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