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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182465661
OION01004932
196621
Bacillota
GTC
Asp
>WENV182465560
OION01000624
144612
Bacillota
TCT
Arg
>WENV182465619
OION01002393
44854
Bacillota
TGA
Ser
>WENV182465688
OION01008348
37071
Bacillota
TGA
Ser
>WENV182465638
OION01003516
59312
Bacillota
CAG
Leu
>WENV182465678
OION01006872
338147
Bacillota
CTC
Glu
>WENV182465676
OION01006431
155273
Bacillota
CAT
Met
>WENV182465760
OION01022357
429429
Bacillota
CCA
Trp
>WENV182465693
OION01008528
41154
Bacillota
TAA
Leu
>WENV182465637
OION01003516
44859
Bacillota
AAG
Leu
>WENV182465608
OION01001854
11034
Bacillota
GGA
Ser
>WENV182465587
OION01001141
338149
Bacillota
CTC
Glu
>WENV182465585
OION01001041
245298
Bacillota
CGG
Pro
>WENV182465763
OION01022886
37269
Bacillota
TGA
Ser
>WENV182465599
OION01001480
411547
Bacillota
CTG
Gln
>WENV182465584
OION01001041
411547
Bacillota
CTG
Gln
>WENV182465620
OION01002393
4624
Bacillota
GCT
Ser
>WENV182465590
OION01001220
263765
Bacillota
TAC
Val
>WENV182465679
OION01007115
235095
Bacillota
GGT
Thr
>WENV182465662
OION01004932
235095
Bacillota
GGT
Thr
>WENV182465576
OION01000821
411549
Bacillota
TTG
Gln
>WENV182465630
OION01003187
235142
Bacillota
CTT
Lys
>WENV182465626
OION01002664
148188
Bacillota
CCG
Arg
>WENV182465580
OION01000965
235124
Bacillota
TGG
Pro
>WENV182465578
OION01000917
338129
Bacillota
TGT
Thr
>WENV182465586
OION01001132
144583
Bacillota
ACG
Arg
>WENV182465742
OION01017049
144652
Bacillota
GTC
Asp
>WENV182465698
OION01009262
247734
Bacillota
TGC
Ala
>WENV182465588
OION01001141
144621
Bacillota
GTT
Asn
>WENV182465573
OION01000777
58712
Bacillota
CAG
Leu
>WENV182465649
OION01004265
245296
Bacillota
CCC
Gly
>WENV182465636
OION01003508
272992
Bacillota
CTT
Lys
>WENV182465549
OION01000542
144594
Bacillota
CAC
Val
>WENV182465539
OION01000446
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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