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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182475815
OIQD01000525
99852
Bacillota
GTA
Tyr
>WENV182475844
OIQD01001879
349107
Bacillota
GCC
Gly
>WENV182475845
OIQD01001879
405363
Bacillota
GCA
Cys
>WENV182475837
OIQD01001442
280428
Bacillota
GAA
Phe
>WENV182475875
OIQD01005581
229015
Bacillota
GTG
His
>WENV182475851
OIQD01002515
175842
Bacillota
CAC
Val
>WENV182475820
OIQD01000832
190476
Bacillota
CAT
Met
>WENV182475871
OIQD01005191
280447
Bacillota
GAC
Val
>WENV182475864
OIQD01003690
5692
Bacillota
GCT
Ser
>WENV182475793
OIQD01000257
73009
Bacillota
CAG
Leu
>WENV182475890
OIQD01007175
291581
Bacillota
CGG
Pro
>WENV182475823
OIQD01000851
175859
Bacillota
TCT
Arg
>WENV182475906
OIQD01009057
404091
Bacillota
TTG
Gln
>WENV182475889
OIQD01007175
480322
Bacillota
CTG
Gln
>WENV182475876
OIQD01005581
401685
Bacillota
TTG
Gln
>WENV182475812
OIQD01000448
175868
Bacillota
GTT
Asn
>WENV182475905
OIQD01009057
289716
Bacillota
GTG
His
>WENV182475811
OIQD01000448
398854
Bacillota
CTC
Glu
>WENV182475856
OIQD01002900
291576
Bacillota
CCC
Gly
>WENV182475900
OIQD01008296
432453
Bacillota
TTC
Glu
>WENV182475881
OIQD01005991
398857
Bacillota
TTC
Glu
>WENV182475808
OIQD01000420
280444
Bacillota
GGT
Thr
>WENV182475832
OIQD01001061
179755
Bacillota
CCG
Arg
>WENV182475821
OIQD01000832
398832
Bacillota
TTC
Glu
>WENV182475901
OIQD01008296
289715
Bacillota
TAC
Val
>WENV182475897
OIQD01007856
398833
Bacillota
TGT
Thr
>WENV182475807
OIQD01000420
175849
Bacillota
GTC
Asp
>WENV182475863
OIQD01003690
56074
Bacillota
TGA
Ser
>WENV182475853
OIQD01002658
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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