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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182483358
OIRI01000247
349107
Bacillota
GCC
Gly
>WENV182483504
OIRI01004416
349107
Bacillota
GCC
Gly
>WENV182483390
OIRI01000542
405363
Bacillota
GCA
Cys
>WENV182483357
OIRI01000247
280428
Bacillota
GAA
Phe
>WENV182483505
OIRI01004416
280466
Bacillota
TAC
Val
>WENV182483498
OIRI01004194
175842
Bacillota
CAC
Val
>WENV182483599
OIRI01020440
184497
Bacillota
GGG
Pro
>WENV182483623
OIRI01032016
179176
Bacillota
ACG
Arg
>WENV182483388
OIRI01000538
190476
Bacillota
CAT
Met
>WENV182483351
OIRI01000233
280447
Bacillota
GAC
Val
>WENV182483398
OIRI01000553
5692
Bacillota
GCT
Ser
>WENV182483321
OIRI01000061
73009
Bacillota
CAG
Leu
>WENV182483597
OIRI01019238
481217
Bacillota
GCA
Cys
>WENV182483377
OIRI01000360
291581
Bacillota
CGG
Pro
>WENV182483379
OIRI01000364
175859
Bacillota
TCT
Arg
>WENV182483349
OIRI01000216
175831
Bacillota
ACG
Arg
>WENV182483508
OIRI01004416
137739
Bacillota
TAG
Leu
>WENV182483541
OIRI01007013
27216
Bacillota
GCT
Ser
>WENV182483376
OIRI01000360
480322
Bacillota
CTG
Gln
>WENV182483373
OIRI01000301
175868
Bacillota
GTT
Asn
>WENV182483329
OIRI01000092
398854
Bacillota
CTC
Glu
>WENV182483386
OIRI01000521
291576
Bacillota
CCC
Gly
>WENV182483452
OIRI01002010
480324
Bacillota
TTG
Gln
>WENV182483431
OIRI01001222
497729
Bacillota
CCA
Trp
>WENV182483603
OIRI01022721
303718
Bacillota
TGT
Thr
>WENV182483585
OIRI01016158
73638
Bacillota
AAG
Leu
>WENV182483371
OIRI01000296
280444
Bacillota
GGT
Thr
>WENV182483394
OIRI01000546
179755
Bacillota
CCG
Arg
>WENV182483464
OIRI01002330
46835
Bacillota
TAA
Leu
>WENV182483389
OIRI01000538
398832
Bacillota
TTC
Glu
>WENV182483433
OIRI01001302
280476
Bacillota
TTT
Lys
>WENV182483556
OIRI01010304
175857
Bacillota
GTG
His
>WENV182483395
OIRI01000548
398833
Bacillota
TGT
Thr
>WENV182483356
OIRI01000247
175849
Bacillota
GTC
Asp
>WENV182483397
OIRI01000553
56074
Bacillota
TGA
Ser
>WENV182483486
OIRI01003258
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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