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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182484480
OIRM01000704
99852
Bacillota
GTA
Tyr
>WENV182484464
OIRM01000460
349107
Bacillota
GCC
Gly
>WENV182484465
OIRM01000460
405363
Bacillota
GCA
Cys
>WENV182484558
OIRM01007552
280428
Bacillota
GAA
Phe
>WENV182484507
OIRM01002387
175842
Bacillota
CAC
Val
>WENV182484508
OIRM01002485
295166
Bacillota
TGC
Ala
>WENV182484500
OIRM01001998
190476
Bacillota
CAT
Met
>WENV182484512
OIRM01002773
280447
Bacillota
GAC
Val
>WENV182484483
OIRM01000844
5692
Bacillota
GCT
Ser
>WENV182484519
OIRM01003344
175825
Bacillota
GAT
Ile
>WENV182484532
OIRM01004474
73009
Bacillota
CAG
Leu
>WENV182484505
OIRM01002309
291581
Bacillota
CGG
Pro
>WENV182484510
OIRM01002594
175859
Bacillota
TCT
Arg
>WENV182484518
OIRM01003344
280436
Bacillota
TGC
Ala
>WENV182484488
OIRM01001145
175831
Bacillota
ACG
Arg
>WENV182484504
OIRM01002309
480322
Bacillota
CTG
Gln
>WENV182484496
OIRM01001568
291576
Bacillota
CCC
Gly
>WENV182484516
OIRM01002885
480324
Bacillota
TTG
Gln
>WENV182484478
OIRM01000665
280444
Bacillota
GGT
Thr
>WENV182484467
OIRM01000487
179755
Bacillota
CCG
Arg
>WENV182484501
OIRM01001998
398832
Bacillota
TTC
Glu
>WENV182484574
OIRM01011067
398833
Bacillota
TGT
Thr
>WENV182484463
OIRM01000460
175849
Bacillota
GTC
Asp
>WENV182484482
OIRM01000844
56074
Bacillota
TGA
Ser
>WENV182484515
OIRM01002800
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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