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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
114 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182612130
OJJY01000012
263765
Bacillota
TAC
Val
>WENV182612209
OJJY01000076
247734
Bacillota
TGC
Ala
>WENV182612286
OJJY01000283
263765
Bacillota
TAC
Val
>WENV182612287
OJJY01000283
240017
Bacillota
GCC
Gly
>WENV182612290
OJJY01000293
235171
Bacillota
CCA
Trp
>WENV182612291
OJJY01000293
196621
Bacillota
GTC
Asp
>WENV182612292
OJJY01000293
235095
Bacillota
GGT
Thr
>WENV182612293
OJJY01000293
235095
Bacillota
GGT
Thr
>WENV182612297
OJJY01000320
144594
Bacillota
CAC
Val
>WENV182612311
OJJY01000365
309417
Bacillota
GGC
Ala
>WENV182612328
OJJY01000431
338129
Bacillota
TGT
Thr
>WENV182612329
OJJY01000431
309417
Bacillota
GGC
Ala
>WENV182612330
OJJY01000448
58712
Bacillota
CAG
Leu
>WENV182612337
OJJY01000460
411547
Bacillota
CTG
Gln
>WENV182612351
OJJY01000507
338149
Bacillota
CTC
Glu
>WENV182612352
OJJY01000507
144621
Bacillota
GTT
Asn
>WENV182612364
OJJY01000543
11034
Bacillota
GGA
Ser
>WENV182612382
OJJY01000639
263765
Bacillota
TAC
Val
>WENV182612384
OJJY01000639
235134
Bacillota
GAA
Phe
>WENV182612385
OJJY01000639
240017
Bacillota
GCC
Gly
>WENV182612404
OJJY01000705
245296
Bacillota
CCC
Gly
>WENV182612405
OJJY01000763
44854
Bacillota
TGA
Ser
>WENV182612406
OJJY01000763
4624
Bacillota
GCT
Ser
>WENV182612407
OJJY01000768
235098
Bacillota
GAC
Val
>WENV182612413
OJJY01000854
80612
Bacillota
GTA
Tyr
>WENV182612425
OJJY01000994
338149
Bacillota
CTC
Glu
>WENV182612426
OJJY01000994
144621
Bacillota
GTT
Asn
>WENV182612428
OJJY01001000
80612
Bacillota
GTA
Tyr
>WENV182612431
OJJY01001041
148188
Bacillota
CCG
Arg
>WENV182612444
OJJY01001190
338128
Bacillota
TTC
Glu
>WENV182612445
OJJY01001202
304022
Bacillota
GCC
Gly
>WENV182612446
OJJY01001202
235117
Bacillota
TAC
Val
>WENV182612450
OJJY01001265
148188
Bacillota
CCG
Arg
>WENV182612451
OJJY01001342
148188
Bacillota
CCG
Arg
>WENV182612454
OJJY01001389
58712
Bacillota
CAG
Leu
>WENV182612466
OJJY01001432
411549
Bacillota
TTG
Gln
>WENV182612476
OJJY01001666
80612
Bacillota
GTA
Tyr
>WENV182612493
OJJY01002033
304022
Bacillota
GCC
Gly
>WENV182612494
OJJY01002033
235117
Bacillota
TAC
Val
>WENV182612496
OJJY01002033
235079
Bacillota
GAA
Phe
>WENV182612503
OJJY01002079
148188
Bacillota
CCG
Arg
>WENV182612511
OJJY01002205
338128
Bacillota
TTC
Glu
>WENV182612515
OJJY01002295
235098
Bacillota
GAC
Val
>WENV182612516
OJJY01002310
411547
Bacillota
CTG
Gln
>WENV182612517
OJJY01002310
245298
Bacillota
CGG
Pro
>WENV182612518
OJJY01002338
144621
Bacillota
GTT
Asn
>WENV182612525
OJJY01002439
144612
Bacillota
TCT
Arg
>WENV182612530
OJJY01002491
240017
Bacillota
GCC
Gly
>WENV182612533
OJJY01002511
235098
Bacillota
GAC
Val
>WENV182612559
OJJY01003143
235098
Bacillota
GAC
Val
>WENV182612564
OJJY01003246
307003
Bacillota
TGC
Ala
>WENV182612565
OJJY01003278
235079
Bacillota
GAA
Phe
>WENV182612566
OJJY01003278
304022
Bacillota
GCC
Gly
>WENV182612567
OJJY01003278
196621
Bacillota
GTC
Asp
>WENV182612568
OJJY01003278
304022
Bacillota
GCC
Gly
>WENV182612579
OJJY01003459
235124
Bacillota
TGG
Pro
>WENV182612583
OJJY01003493
144612
Bacillota
TCT
Arg
>WENV182612585
OJJY01003493
58712
Bacillota
CAG
Leu
>WENV182612586
OJJY01003506
411547
Bacillota
CTG
Gln
>WENV182612589
OJJY01003633
309417
Bacillota
GGC
Ala
>WENV182612595
OJJY01003913
235079
Bacillota
GAA
Phe
>WENV182612596
OJJY01003913
304022
Bacillota
GCC
Gly
>WENV182612599
OJJY01004005
411549
Bacillota
TTG
Gln
>WENV182612604
OJJY01004252
235079
Bacillota
GAA
Phe
>WENV182612605
OJJY01004312
338149
Bacillota
CTC
Glu
>WENV182612606
OJJY01004312
272992
Bacillota
CTT
Lys
>WENV182612609
OJJY01004431
304022
Bacillota
GCC
Gly
>WENV182612610
OJJY01004431
235117
Bacillota
TAC
Val
>WENV182612611
OJJY01004431
196621
Bacillota
GTC
Asp
>WENV182612612
OJJY01004431
235079
Bacillota
GAA
Phe
>WENV182612613
OJJY01004431
304022
Bacillota
GCC
Gly
>WENV182612615
OJJY01004480
196621
Bacillota
GTC
Asp
>WENV182612616
OJJY01004480
304022
Bacillota
GCC
Gly
>WENV182612618
OJJY01004484
411549
Bacillota
TTG
Gln
>WENV182612619
OJJY01004637
4624
Bacillota
GCT
Ser
>WENV182612623
OJJY01004776
144583
Bacillota
ACG
Arg
>WENV182612624
OJJY01004934
304022
Bacillota
GCC
Gly
>WENV182612628
OJJY01005195
144621
Bacillota
GTT
Asn
>WENV182612636
OJJY01005496
144594
Bacillota
CAC
Val
>WENV182612638
OJJY01005613
235124
Bacillota
TGG
Pro
>WENV182612644
OJJY01005713
411547
Bacillota
CTG
Gln
>WENV182612645
OJJY01005820
37213
Bacillota
TGA
Ser
>WENV182612660
OJJY01006485
245298
Bacillota
CGG
Pro
>WENV182612688
OJJY01007414
37269
Bacillota
TGA
Ser
>WENV182612718
OJJY01008543
235098
Bacillota
GAC
Val
>WENV182612722
OJJY01008899
235124
Bacillota
TGG
Pro
>WENV182612758
OJJY01011698
338129
Bacillota
TGT
Thr
>WENV182612768
OJJY01012581
148188
Bacillota
CCG
Arg
>WENV182612774
OJJY01013278
304022
Bacillota
GCC
Gly
>WENV182612780
OJJY01014417
144612
Bacillota
TCT
Arg
>WENV182612801
OJJY01016558
144612
Bacillota
TCT
Arg
>WENV182612804
OJJY01016847
304022
Bacillota
GCC
Gly
>WENV182612807
OJJY01017240
411547
Bacillota
CTG
Gln
>WENV182612818
OJJY01018810
157635
Bacillota
TCT
Arg
>WENV182612819
OJJY01018810
144610
Bacillota
GTG
His
>WENV182612820
OJJY01018810
340802
Bacillota
TTG
Gln
>WENV182612827
OJJY01019602
413491
Bacillota
CCA
Trp
>WENV182612828
OJJY01019602
243206
Bacillota
GTG
His
>WENV182612836
OJJY01020050
144594
Bacillota
CAC
Val
>WENV182612844
OJJY01021105
235079
Bacillota
GAA
Phe
>WENV182612846
OJJY01021671
304022
Bacillota
GCC
Gly
>WENV182612867
OJJY01023836
100326
Bacillota
GTA
Tyr
>WENV182612869
OJJY01023836
238974
Bacillota
GAA
Phe
>WENV182612877
OJJY01025156
235095
Bacillota
GGT
Thr
>WENV182612885
OJJY01027070
40036
Bacillota
TAA
Leu
>WENV182612886
OJJY01027070
166657
Bacillota
ACG
Arg
>WENV182612943
OJJY01036696
58712
Bacillota
CAG
Leu
>WENV182612953
OJJY01038742
144612
Bacillota
TCT
Arg
>WENV182612954
OJJY01038997
238910
Bacillota
CTT
Lys
>WENV182612963
OJJY01039941
272992
Bacillota
CTT
Lys
>WENV182612977
OJJY01043792
304022
Bacillota
GCC
Gly
>WENV182612978
OJJY01043792
196621
Bacillota
GTC
Asp
>WENV182612979
OJJY01043792
304022
Bacillota
GCC
Gly
>WENV182612988
OJJY01045163
235095
Bacillota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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