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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182691268
OJOF01000215
144612
Bacillota
TCT
Arg
>WENV182691971
OJOF01006304
267649
Bacillota
TAC
Val
>WENV182691780
OJOF01002650
267556
Bacillota
TAC
Val
>WENV182691317
OJOF01000303
235098
Bacillota
GAC
Val
>WENV182692110
OJOF01015096
338152
Bacillota
TTC
Glu
>WENV182692203
OJOF01030316
144577
Bacillota
GAT
Ile
>WENV182691150
OJOF01000026
59312
Bacillota
CAG
Leu
>WENV182691757
OJOF01002423
238910
Bacillota
CTT
Lys
>WENV182691250
OJOF01000173
338147
Bacillota
CTC
Glu
>WENV182691192
OJOF01000075
338147
Bacillota
CTC
Glu
>WENV182691164
OJOF01000042
338147
Bacillota
CTC
Glu
>WENV182691154
OJOF01000029
338147
Bacillota
CTC
Glu
>WENV182691153
OJOF01000029
338147
Bacillota
CTC
Glu
>WENV182691152
OJOF01000029
338147
Bacillota
CTC
Glu
>WENV182692152
OJOF01018850
235150
Bacillota
TGC
Ala
>WENV182692176
OJOF01022956
155273
Bacillota
CAT
Met
>WENV182691201
OJOF01000077
235114
Bacillota
TTT
Lys
>WENV182691450
OJOF01000624
182792
Bacillota
GTC
Asp
>WENV182691149
OJOF01000026
44859
Bacillota
AAG
Leu
>WENV182692098
OJOF01013799
268272
Bacillota
TGC
Ala
>WENV182691627
OJOF01001439
11034
Bacillota
GGA
Ser
>WENV182691234
OJOF01000134
11034
Bacillota
GGA
Ser
>WENV182691866
OJOF01004176
274189
Bacillota
TGT
Thr
>WENV182692202
OJOF01030316
235087
Bacillota
TGC
Ala
>WENV182691203
OJOF01000078
173314
Bacillota
GAT
Ile
>WENV182691499
OJOF01000762
245298
Bacillota
CGG
Pro
>WENV182691446
OJOF01000617
37269
Bacillota
TGA
Ser
>WENV182692080
OJOF01012549
152492
Bacillota
GGG
Pro
>WENV182691245
OJOF01000161
152492
Bacillota
GGG
Pro
>WENV182691697
OJOF01001956
235078
Bacillota
TAC
Val
>WENV182691199
OJOF01000077
144610
Bacillota
GTG
His
>WENV182691700
OJOF01001956
240017
Bacillota
GCC
Gly
>WENV182691893
OJOF01004428
411547
Bacillota
CTG
Gln
>WENV182691535
OJOF01000897
411547
Bacillota
CTG
Gln
>WENV182691498
OJOF01000762
411547
Bacillota
CTG
Gln
>WENV182691193
OJOF01000076
411547
Bacillota
CTG
Gln
>WENV182691748
OJOF01002359
147684
Bacillota
ACG
Arg
>WENV182691524
OJOF01000864
147684
Bacillota
ACG
Arg
>WENV182691764
OJOF01002497
263765
Bacillota
TAC
Val
>WENV182691143
OJOF01000019
263765
Bacillota
TAC
Val
>WENV182692140
OJOF01017979
18852
Bacillota
GCT
Ser
>WENV182691811
OJOF01003041
235095
Bacillota
GGT
Thr
>WENV182691452
OJOF01000624
235095
Bacillota
GGT
Thr
>WENV182691451
OJOF01000624
235095
Bacillota
GGT
Thr
>WENV182691655
OJOF01001645
411549
Bacillota
TTG
Gln
>WENV182691424
OJOF01000550
411549
Bacillota
TTG
Gln
>WENV182691209
OJOF01000087
235142
Bacillota
CTT
Lys
>WENV182691130
OJOF01000010
235142
Bacillota
CTT
Lys
>WENV182691833
OJOF01003381
148188
Bacillota
CCG
Arg
>WENV182691635
OJOF01001478
148188
Bacillota
CCG
Arg
>WENV182691531
OJOF01000879
80612
Bacillota
GTA
Tyr
>WENV182691381
OJOF01000428
80612
Bacillota
GTA
Tyr
>WENV182691788
OJOF01002752
235124
Bacillota
TGG
Pro
>WENV182691701
OJOF01001960
235124
Bacillota
TGG
Pro
>WENV182691594
OJOF01001191
235124
Bacillota
TGG
Pro
>WENV182691589
OJOF01001184
338129
Bacillota
TGT
Thr
>WENV182691400
OJOF01000480
144583
Bacillota
ACG
Arg
>WENV182691878
OJOF01004281
144652
Bacillota
GTC
Asp
>WENV182692105
OJOF01014733
247734
Bacillota
TGC
Ala
>WENV182691775
OJOF01002617
235171
Bacillota
CCA
Trp
>WENV182691449
OJOF01000624
235171
Bacillota
CCA
Trp
>WENV182691785
OJOF01002704
144621
Bacillota
GTT
Asn
>WENV182691720
OJOF01002095
144621
Bacillota
GTT
Asn
>WENV182691274
OJOF01000224
235113
Bacillota
GAA
Phe
>WENV182691899
OJOF01004704
277200
Bacillota
GGC
Ala
>WENV182691885
OJOF01004368
243098
Bacillota
GGT
Thr
>WENV182691842
OJOF01003571
58712
Bacillota
CAG
Leu
>WENV182691563
OJOF01001041
58712
Bacillota
CAG
Leu
>WENV182691492
OJOF01000752
58712
Bacillota
CAG
Leu
>WENV182691318
OJOF01000308
58712
Bacillota
CAG
Leu
>WENV182691798
OJOF01002867
245296
Bacillota
CCC
Gly
>WENV182691784
OJOF01002662
245296
Bacillota
CCC
Gly
>WENV182691689
OJOF01001867
344240
Bacillota
GCC
Gly
>WENV182691746
OJOF01002347
144594
Bacillota
CAC
Val
>WENV182691170
OJOF01000050
95563
Bacillota
GTA
Tyr
>WENV182691854
OJOF01003869
272488
Bacillota
GAA
Phe
>WENV182691790
OJOF01002771
272488
Bacillota
GAA
Phe
>WENV182691456
OJOF01000632
238945
Bacillota
GCC
Gly
>WENV182692027
OJOF01009003
249259
Bacillota
GCC
Gly
>WENV182692121
OJOF01016295
273862
Bacillota
TGC
Ala
>WENV182691202
OJOF01000078
273862
Bacillota
TGC
Ala
>WENV182691398
OJOF01000474
338128
Bacillota
TTC
Glu
>WENV182691841
OJOF01003563
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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