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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182692967
OJOG01029631
44859
Bacillota
AAG
Leu
>WENV182692668
OJOG01001706
147684
Bacillota
ACG
Arg
>WENV182692691
OJOG01002712
144583
Bacillota
ACG
Arg
>WENV182692696
OJOG01002807
59312
Bacillota
CAG
Leu
>WENV182692884
OJOG01016252
58712
Bacillota
CAG
Leu
>WENV182692953
OJOG01025704
236044
Bacillota
CAT
Met
>WENV182692749
OJOG01005018
343021
Bacillota
CAT
Met
>WENV182693001
OJOG01040337
245386
Bacillota
CCA
Trp
>WENV182692909
OJOG01018941
235171
Bacillota
CCA
Trp
>WENV182692681
OJOG01002203
245296
Bacillota
CCC
Gly
>WENV182692678
OJOG01001911
413179
Bacillota
CCC
Gly
>WENV182692391
OJOG01000139
148188
Bacillota
CCG
Arg
>WENV182692588
OJOG01000979
152018
Bacillota
CCT
Arg
>WENV182692777
OJOG01006124
245298
Bacillota
CGG
Pro
>WENV182692985
OJOG01034395
338147
Bacillota
CTC
Glu
>WENV182692501
OJOG01000379
338147
Bacillota
CTC
Glu
>WENV182692823
OJOG01010447
411547
Bacillota
CTG
Gln
>WENV182692776
OJOG01006124
411547
Bacillota
CTG
Gln
>WENV182692464
OJOG01000288
238910
Bacillota
CTT
Lys
>WENV182692788
OJOG01007202
235091
Bacillota
CTT
Lys
>WENV182692573
OJOG01000857
235142
Bacillota
CTT
Lys
>WENV182692496
OJOG01000351
235142
Bacillota
CTT
Lys
>WENV182692891
OJOG01017073
153911
Bacillota
GAT
Ile
>WENV182692925
OJOG01021067
412387
Bacillota
GCA
Cys
>WENV182692834
OJOG01011552
340265
Bacillota
GCC
Gly
>WENV182692871
OJOG01014603
240017
Bacillota
GCC
Gly
>WENV182692748
OJOG01004922
238945
Bacillota
GCC
Gly
>WENV182692627
OJOG01001319
249259
Bacillota
GCC
Gly
>WENV182692751
OJOG01005035
4624
Bacillota
GCT
Ser
>WENV182692822
OJOG01010407
11034
Bacillota
GGA
Ser
>WENV182692911
OJOG01018941
235095
Bacillota
GGT
Thr
>WENV182692935
OJOG01022582
80612
Bacillota
GTA
Tyr
>WENV182692649
OJOG01001543
95563
Bacillota
GTA
Tyr
>WENV182692638
OJOG01001365
144652
Bacillota
GTC
Asp
>WENV182692912
OJOG01018994
152497
Bacillota
GTC
Asp
>WENV182692922
OJOG01020632
144610
Bacillota
GTG
His
>WENV182692898
OJOG01017384
144610
Bacillota
GTG
His
>WENV182692655
OJOG01001571
144610
Bacillota
GTG
His
>WENV182692828
OJOG01011200
413152
Bacillota
TCC
Gly
>WENV182692764
OJOG01005457
413152
Bacillota
TCC
Gly
>WENV182692660
OJOG01001629
144612
Bacillota
TCT
Arg
>WENV182692921
OJOG01020632
157635
Bacillota
TCT
Arg
>WENV182692942
OJOG01023921
37213
Bacillota
TGA
Ser
>WENV182692750
OJOG01005035
44854
Bacillota
TGA
Ser
>WENV182692849
OJOG01013593
37071
Bacillota
TGA
Ser
>WENV182692952
OJOG01025601
246023
Bacillota
TGC
Ala
>WENV182692818
OJOG01010158
235150
Bacillota
TGC
Ala
>WENV182692821
OJOG01010387
338129
Bacillota
TGT
Thr
>WENV182692460
OJOG01000285
338128
Bacillota
TTC
Glu
>WENV182692820
OJOG01010373
411549
Bacillota
TTG
Gln
>WENV182692900
OJOG01017384
235127
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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