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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182722769
OJPQ01011115
404076
Bacillota
GCC
Gly
>WENV182722887
OJPQ01023543
280500
Bacillota
TGC
Ala
>WENV182722814
OJPQ01014505
184504
Bacillota
GTC
Asp
>WENV182722770
OJPQ01011427
405363
Bacillota
GCA
Cys
>WENV182722506
OJPQ01001584
280492
Bacillota
CTT
Lys
>WENV182722500
OJPQ01001524
175842
Bacillota
CAC
Val
>WENV182722981
OJPQ01041895
291629
Bacillota
CCA
Trp
>WENV182722780
OJPQ01011724
236579
Bacillota
GAT
Ile
>WENV182722616
OJPQ01004233
184497
Bacillota
GGG
Pro
>WENV182722847
OJPQ01017697
376224
Bacillota
TGG
Pro
>WENV182722564
OJPQ01002641
179176
Bacillota
ACG
Arg
>WENV182722779
OJPQ01011724
295166
Bacillota
TGC
Ala
>WENV182722375
OJPQ01000366
190476
Bacillota
CAT
Met
>WENV182722454
OJPQ01000792
73664
Bacillota
CAG
Leu
>WENV182722666
OJPQ01005965
73664
Bacillota
CAG
Leu
>WENV182722627
OJPQ01004709
280447
Bacillota
GAC
Val
>WENV182722590
OJPQ01003056
5692
Bacillota
GCT
Ser
>WENV182722986
OJPQ01043768
481217
Bacillota
GCA
Cys
>WENV182723000
OJPQ01046403
399266
Bacillota
>WENV182722723
OJPQ01008354
291581
Bacillota
CGG
Pro
>WENV182722415
OJPQ01000473
175859
Bacillota
TCT
Arg
>WENV182722598
OJPQ01003457
175831
Bacillota
ACG
Arg
>WENV182722731
OJPQ01008666
284627
Bacillota
GAA
Phe
>WENV182722703
OJPQ01007242
346451
Bacillota
TTT
Lys
>WENV182722979
OJPQ01041215
175868
Bacillota
GTT
Asn
>WENV182722740
OJPQ01009064
398854
Bacillota
CTC
Glu
>WENV182722667
OJPQ01005983
291576
Bacillota
CCC
Gly
>WENV182722539
OJPQ01002134
480324
Bacillota
TTG
Gln
>WENV182722597
OJPQ01003448
497729
Bacillota
CCA
Trp
>WENV182722612
OJPQ01004138
56079
Bacillota
AAG
Leu
>WENV182722677
OJPQ01006325
323864
Bacillota
TGC
Ala
>WENV182722811
OJPQ01014249
186051
Bacillota
GAT
Ile
>WENV182722739
OJPQ01008978
280444
Bacillota
GGT
Thr
>WENV182722920
OJPQ01029958
46643
Bacillota
TGA
Ser
>WENV182722567
OJPQ01002686
179755
Bacillota
CCG
Arg
>WENV182722376
OJPQ01000366
398832
Bacillota
TTC
Glu
>WENV182722459
OJPQ01000843
398852
Bacillota
CTC
Glu
>WENV182722503
OJPQ01001569
398852
Bacillota
CTC
Glu
>WENV182722757
OJPQ01010043
398852
Bacillota
CTC
Glu
>WENV182722778
OJPQ01011586
289123
Bacillota
GGT
Thr
>WENV182722928
OJPQ01032610
298260
Bacillota
GTT
Asn
>WENV182722647
OJPQ01005555
285756
Bacillota
GCC
Gly
>WENV182722766
OJPQ01010656
398833
Bacillota
TGT
Thr
>WENV182722589
OJPQ01003056
56074
Bacillota
TGA
Ser
>WENV182722679
OJPQ01006414
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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