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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182751757
OJRB01000016
175842
Bacillota
CAC
Val
>WENV182751769
OJRB01000027
303718
Bacillota
TGT
Thr
>WENV182751853
OJRB01000190
280447
Bacillota
GAC
Val
>WENV182751857
OJRB01000204
73009
Bacillota
CAG
Leu
>WENV182751871
OJRB01000262
179755
Bacillota
CCG
Arg
>WENV182751874
OJRB01000269
5692
Bacillota
GCT
Ser
>WENV182751873
OJRB01000269
56074
Bacillota
TGA
Ser
>WENV182751887
OJRB01000284
317482
Bacillota
TAC
Val
>WENV182751895
OJRB01000290
280444
Bacillota
GGT
Thr
>WENV182751898
OJRB01000290
280444
Bacillota
GGT
Thr
>WENV182751897
OJRB01000290
175849
Bacillota
GTC
Asp
>WENV182751909
OJRB01000326
480322
Bacillota
CTG
Gln
>WENV182751929
OJRB01000420
280447
Bacillota
GAC
Val
>WENV182751933
OJRB01000442
291576
Bacillota
CCC
Gly
>WENV182751956
OJRB01000577
73009
Bacillota
CAG
Leu
>WENV182751971
OJRB01000623
405363
Bacillota
GCA
Cys
>WENV182751972
OJRB01000623
480324
Bacillota
TTG
Gln
>WENV182751982
OJRB01000670
175868
Bacillota
GTT
Asn
>WENV182752006
OJRB01000778
303718
Bacillota
TGT
Thr
>WENV182752010
OJRB01000781
175868
Bacillota
GTT
Asn
>WENV182752025
OJRB01000851
398833
Bacillota
TGT
Thr
>WENV182752046
OJRB01000930
46835
Bacillota
TAA
Leu
>WENV182752047
OJRB01000943
280473
Bacillota
TGG
Pro
>WENV182752079
OJRB01001186
215243
Bacillota
CAT
Met
>WENV182752085
OJRB01001223
398852
Bacillota
CTC
Glu
>WENV182752095
OJRB01001320
346451
Bacillota
TTT
Lys
>WENV182752101
OJRB01001397
398852
Bacillota
CTC
Glu
>WENV182752124
OJRB01001785
99852
Bacillota
GTA
Tyr
>WENV182752173
OJRB01002290
321753
Bacillota
GCC
Gly
>WENV182752175
OJRB01002314
179755
Bacillota
CCG
Arg
>WENV182752188
OJRB01002510
25955
Bacillota
GCT
Ser
>WENV182752212
OJRB01002659
280476
Bacillota
TTT
Lys
>WENV182752209
OJRB01002659
179166
Bacillota
TCT
Arg
>WENV182752232
OJRB01002938
284723
Bacillota
TAC
Val
>WENV182752238
OJRB01003058
190476
Bacillota
CAT
Met
>WENV182752239
OJRB01003058
398832
Bacillota
TTC
Glu
>WENV182752249
OJRB01003275
5692
Bacillota
GCT
Ser
>WENV182752248
OJRB01003275
56074
Bacillota
TGA
Ser
>WENV182752273
OJRB01003918
289123
Bacillota
GGT
Thr
>WENV182752279
OJRB01004044
56079
Bacillota
AAG
Leu
>WENV182752321
OJRB01005127
27216
Bacillota
GCT
Ser
>WENV182752337
OJRB01005881
309916
Bacillota
TTT
Lys
>WENV182752338
OJRB01005946
179176
Bacillota
ACG
Arg
>WENV182752343
OJRB01006055
184497
Bacillota
GGG
Pro
>WENV182752405
OJRB01008650
497729
Bacillota
CCA
Trp
>WENV182752412
OJRB01008808
186123
Bacillota
GTC
Asp
>WENV182752413
OJRB01008808
291634
Bacillota
GAA
Phe
>WENV182752422
OJRB01009196
117745
Bacillota
GTA
Tyr
>WENV182752426
OJRB01009395
303718
Bacillota
TGT
Thr
>WENV182752437
OJRB01009723
175857
Bacillota
GTG
His
>WENV182752458
OJRB01010654
280492
Bacillota
CTT
Lys
>WENV182752468
OJRB01011322
398857
Bacillota
TTC
Glu
>WENV182752482
OJRB01012176
406553
Bacillota
TTG
Gln
>WENV182752522
OJRB01014369
291581
Bacillota
CGG
Pro
>WENV182752521
OJRB01014369
480322
Bacillota
CTG
Gln
>WENV182752528
OJRB01014998
283367
Bacillota
GCC
Gly
>WENV182752533
OJRB01015100
510477
Bacillota
TCC
Gly
>WENV182752613
OJRB01022867
280500
Bacillota
TGC
Ala
>WENV182752655
OJRB01032870
201856
Bacillota
GAT
Ile
>WENV182752664
OJRB01033643
189473
Bacillota
GAT
Ile
>WENV182752677
OJRB01036039
280428
Bacillota
GAA
Phe
>WENV182752682
OJRB01036507
356775
Bacillota
TGT
Thr
>WENV182752700
OJRB01043249
175831
Bacillota
ACG
Arg
>WENV182752702
OJRB01044080
280486
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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