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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182817834
OJZM01000738
243647
Bacillota
TTT
Lys
>WENV182817722
OJZM01000324
16842
Bacillota
CGA
Ser
>WENV182817938
OJZM01006813
18465
Bacillota
GCT
Ser
>WENV182817909
OJZM01002322
10560
Bacillota
GGA
Ser
>WENV182817934
OJZM01006242
37089
Bacillota
TAA
Leu
>WENV182817588
OJZM01000098
193699
Bacillota
CAT
Met
>WENV182817919
OJZM01004831
146697
Bacillota
ACG
Arg
>WENV182817851
OJZM01000742
237286
Bacillota
CTT
Lys
>WENV182817898
OJZM01001296
295019
Bacillota
TGC
Ala
>WENV182817895
OJZM01001296
295019
Bacillota
TGC
Ala
>WENV182817848
OJZM01000742
113680
Bacillota
TAG
Leu
>WENV182817839
OJZM01000738
391536
Bacillota
TTC
Glu
>WENV182817835
OJZM01000738
391536
Bacillota
TTC
Glu
>WENV182817875
OJZM01000892
16235
Bacillota
>WENV182817850
OJZM01000742
412107
Bacillota
TCC
Gly
>WENV182817843
OJZM01000742
412107
Bacillota
TCC
Gly
>WENV182817640
OJZM01000169
16834
Bacillota
GCT
Ser
>WENV182817917
OJZM01003221
114002
Bacillota
CAA
Leu
>WENV182817854
OJZM01000788
114002
Bacillota
CAA
Leu
>WENV182817933
OJZM01006242
146698
Bacillota
CAT
Met
>WENV182817840
OJZM01000738
243612
Bacillota
TAC
Val
>WENV182817836
OJZM01000738
243612
Bacillota
TAC
Val
>WENV182817931
OJZM01006242
39475
Bacillota
TAA
Leu
>WENV182817920
OJZM01004959
258936
Bacillota
GGT
Thr
>WENV182817891
OJZM01001178
411585
Bacillota
GCA
Cys
>WENV182817479
OJZM01000018
147135
Bacillota
ACG
Arg
>WENV182817846
OJZM01000742
339364
Bacillota
TTG
Gln
>WENV182817613
OJZM01000139
342895
Bacillota
CAT
Met
>WENV182817901
OJZM01001349
339362
Bacillota
GTT
Asn
>WENV182817751
OJZM01000429
314670
Bacillota
GAA
Phe
>WENV182817733
OJZM01000381
194150
Bacillota
TGG
Pro
>WENV182817897
OJZM01001296
198159
Bacillota
CAT
Met
>WENV182817849
OJZM01000742
339363
Bacillota
GCC
Gly
>WENV182817842
OJZM01000742
339363
Bacillota
GCC
Gly
>WENV182817889
OJZM01001178
144767
Bacillota
GTG
His
>WENV182817578
OJZM01000091
235197
Bacillota
GTC
Asp
>WENV182817837
OJZM01000738
368876
Bacillota
GCC
Gly
>WENV182817580
OJZM01000091
368876
Bacillota
GCC
Gly
>WENV182817893
OJZM01001178
235288
Bacillota
TAC
Val
>WENV182817845
OJZM01000742
237287
Bacillota
GTG
His
>WENV182817924
OJZM01005402
163753
Bacillota
TGG
Pro
>WENV182817922
OJZM01005402
163753
Bacillota
TGG
Pro
>WENV182817876
OJZM01001002
118077
Bacillota
>WENV182817857
OJZM01000840
436750
Bacillota
TCC
Gly
>WENV182817825
OJZM01000686
243613
Bacillota
GTG
His
>WENV182817935
OJZM01006436
23575
Bacillota
GGA
Ser
>WENV182817892
OJZM01001178
144833
Bacillota
ACG
Arg
>WENV182817894
OJZM01001285
44874
Bacillota
CAA
Leu
>WENV182817844
OJZM01000742
145469
Bacillota
TCT
Arg
>WENV182817923
OJZM01005402
235292
Bacillota
CCA
Trp
>WENV182817788
OJZM01000539
152491
Bacillota
CAT
Met
>WENV182817900
OJZM01001332
1080
Bacillota
>WENV182817784
OJZM01000539
273029
Bacillota
TGT
Thr
>WENV182817787
OJZM01000539
281472
Bacillota
GGT
Thr
>WENV182817735
OJZM01000381
178024
Bacillota
TCT
Arg
>WENV182817937
OJZM01006813
16361
Bacillota
TGA
Ser
>WENV182817718
OJZM01000305
413657
Bacillota
CCC
Gly
>WENV182817838
OJZM01000738
287034
Bacillota
GTT
Asn
>WENV182817833
OJZM01000738
287034
Bacillota
GTT
Asn
>WENV182817826
OJZM01000686
343027
Bacillota
TTG
Gln
>WENV182817847
OJZM01000742
237283
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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