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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182828840
OKDJ01002515
270475
Bacillota
GAA
Phe
>WENV182828768
OKDJ01000249
243647
Bacillota
TTT
Lys
>WENV182828852
OKDJ01003636
361659
Bacillota
GCC
Gly
>WENV182828722
OKDJ01000092
37110
Bacillota
TAA
Leu
>WENV182828716
OKDJ01000089
16842
Bacillota
CGA
Ser
>WENV182828721
OKDJ01000092
194265
Bacillota
CAT
Met
>WENV182828851
OKDJ01003636
114359
Bacillota
TAG
Leu
>WENV182828723
OKDJ01000093
16834
Bacillota
GCT
Ser
>WENV182828694
OKDJ01000052
114002
Bacillota
CAA
Leu
>WENV182828809
OKDJ01000948
338550
Bacillota
>WENV182828806
OKDJ01000881
37437
Bacillota
TAA
Leu
>WENV182828794
OKDJ01000460
258936
Bacillota
GGT
Thr
>WENV182828829
OKDJ01001737
147135
Bacillota
ACG
Arg
>WENV182828750
OKDJ01000162
147135
Bacillota
ACG
Arg
>WENV182828706
OKDJ01000067
342895
Bacillota
CAT
Met
>WENV182828693
OKDJ01000051
342895
Bacillota
CAT
Met
>WENV182828756
OKDJ01000192
194150
Bacillota
TGG
Pro
>WENV182828817
OKDJ01001526
198159
Bacillota
CAT
Met
>WENV182828854
OKDJ01003636
150597
Bacillota
TCT
Arg
>WENV182828737
OKDJ01000116
235197
Bacillota
GTC
Asp
>WENV182828683
OKDJ01000043
368876
Bacillota
GCC
Gly
>WENV182828848
OKDJ01003636
235905
Bacillota
GTG
His
>WENV182828853
OKDJ01003636
411739
Bacillota
TCC
Gly
>WENV182828818
OKDJ01001526
235506
Bacillota
TGC
Ala
>WENV182828850
OKDJ01003636
237963
Bacillota
TTT
Lys
>WENV182828766
OKDJ01000249
243613
Bacillota
GTG
His
>WENV182828691
OKDJ01000046
152491
Bacillota
CAT
Met
>WENV182828669
OKDJ01000034
287296
Bacillota
TTT
Lys
>WENV182828690
OKDJ01000046
281472
Bacillota
GGT
Thr
>WENV182828758
OKDJ01000192
178024
Bacillota
TCT
Arg
>WENV182828808
OKDJ01000921
413657
Bacillota
CCC
Gly
>WENV182828810
OKDJ01001002
273862
Bacillota
TGC
Ala
>WENV182828767
OKDJ01000249
343027
Bacillota
TTG
Gln
>WENV182828828
OKDJ01001737
235696
Bacillota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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