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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182890495
OKSG01000037
338127
Bacillota
TTG
Gln
>WENV182890568
OKSG01000214
298620
Bacillota
CAT
Met
>WENV182890598
OKSG01000359
235079
Bacillota
GAA
Phe
>WENV182890663
OKSG01001208
235113
Bacillota
GAA
Phe
>WENV182890668
OKSG01001219
245370
Bacillota
TGT
Thr
>WENV182890670
OKSG01001219
243098
Bacillota
GGT
Thr
>WENV182890715
OKSG01002098
169968
Bacillota
CAT
Met
>WENV182890807
OKSG01005657
44859
Bacillota
AAG
Leu
>WENV182890823
OKSG01006702
148239
Bacillota
TCT
Arg
>WENV182890832
OKSG01006946
95563
Bacillota
GTA
Tyr
>WENV182890858
OKSG01009460
148188
Bacillota
CCG
Arg
>WENV182890863
OKSG01009917
37269
Bacillota
TGA
Ser
>WENV182890866
OKSG01010526
235150
Bacillota
TGC
Ala
>WENV182890878
OKSG01012540
198135
Bacillota
GAT
Ile
>WENV182890877
OKSG01012540
299139
Bacillota
TGC
Ala
>WENV182890888
OKSG01014684
429429
Bacillota
CCA
Trp
>WENV182890917
OKSG01022268
344240
Bacillota
GCC
Gly
>WENV182890921
OKSG01023593
59312
Bacillota
CAG
Leu
>WENV182890928
OKSG01025323
235137
Bacillota
TGC
Ala
>WENV182890933
OKSG01026988
240017
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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