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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182942627
OKVH01002244
99852
Bacillota
GTA
Tyr
>WENV182942675
OKVH01002922
99852
Bacillota
GTA
Tyr
>WENV182943033
OKVH01018319
187706
Bacillota
TGG
Pro
>WENV182943172
OKVH01036092
280500
Bacillota
TGC
Ala
>WENV182942626
OKVH01002244
405363
Bacillota
GCA
Cys
>WENV182942624
OKVH01002244
280428
Bacillota
GAA
Phe
>WENV182942470
OKVH01000896
291579
Bacillota
GAA
Phe
>WENV182942783
OKVH01005351
291579
Bacillota
GAA
Phe
>WENV182943211
OKVH01041951
285945
Bacillota
TTT
Lys
>WENV182942832
OKVH01006369
302145
Bacillota
GAA
Phe
>WENV182942683
OKVH01003101
280492
Bacillota
CTT
Lys
>WENV182942507
OKVH01001144
175842
Bacillota
CAC
Val
>WENV182942560
OKVH01001612
184497
Bacillota
GGG
Pro
>WENV182942931
OKVH01010461
184497
Bacillota
GGG
Pro
>WENV182943185
OKVH01037625
194260
Bacillota
GAT
Ile
>WENV182942916
OKVH01009993
179563
Bacillota
GAT
Ile
>WENV182943214
OKVH01042167
179242
Bacillota
TCT
Arg
>WENV182943166
OKVH01035120
283493
Bacillota
CTC
Glu
>WENV182942364
OKVH01000481
190476
Bacillota
CAT
Met
>WENV182942564
OKVH01001656
73664
Bacillota
CAG
Leu
>WENV182942407
OKVH01000605
280447
Bacillota
GAC
Val
>WENV182942495
OKVH01001018
5692
Bacillota
GCT
Ser
>WENV182942768
OKVH01004744
186123
Bacillota
GTC
Asp
>WENV182943209
OKVH01041501
175825
Bacillota
GAT
Ile
>WENV182942167
OKVH01000026
73009
Bacillota
CAG
Leu
>WENV182942160
OKVH01000014
487804
Bacillota
GGT
Thr
>WENV182943188
OKVH01038122
481217
Bacillota
GCA
Cys
>WENV182942878
OKVH01008607
189473
Bacillota
GAT
Ile
>WENV182942519
OKVH01001266
291581
Bacillota
CGG
Pro
>WENV182942213
OKVH01000133
175859
Bacillota
TCT
Arg
>WENV182943208
OKVH01041501
280436
Bacillota
TGC
Ala
>WENV182942393
OKVH01000570
175831
Bacillota
ACG
Arg
>WENV182942771
OKVH01004841
332181
Bacillota
TGT
Thr
>WENV182942769
OKVH01004744
291634
Bacillota
GAA
Phe
>WENV182942427
OKVH01000728
294020
Bacillota
TAC
Val
>WENV182942734
OKVH01004187
294020
Bacillota
TAC
Val
>WENV182942781
OKVH01005321
332864
Bacillota
CTT
Lys
>WENV182943210
OKVH01041951
282730
Bacillota
TAC
Val
>WENV182942716
OKVH01003877
409171
Bacillota
TGT
Thr
>WENV182942518
OKVH01001266
480322
Bacillota
CTG
Gln
>WENV182942469
OKVH01000892
187364
Bacillota
CAT
Met
>WENV182942594
OKVH01001918
401685
Bacillota
TTG
Gln
>WENV182942339
OKVH01000397
175868
Bacillota
GTT
Asn
>WENV182943062
OKVH01020426
119278
Bacillota
TAG
Leu
>WENV182943095
OKVH01023617
322848
Bacillota
CTT
Lys
>WENV182942338
OKVH01000397
398854
Bacillota
CTC
Glu
>WENV182942499
OKVH01001048
291576
Bacillota
CCC
Gly
>WENV182942514
OKVH01001225
480324
Bacillota
TTG
Gln
>WENV182942866
OKVH01008188
480324
Bacillota
TTG
Gln
>WENV182942659
OKVH01002733
303718
Bacillota
TGT
Thr
>WENV182942776
OKVH01005005
56079
Bacillota
AAG
Leu
>WENV182942876
OKVH01008510
323864
Bacillota
TGC
Ala
>WENV182943034
OKVH01018319
179243
Bacillota
CGG
Pro
>WENV182942700
OKVH01003445
117745
Bacillota
GTA
Tyr
>WENV182942803
OKVH01005804
280444
Bacillota
GGT
Thr
>WENV182942867
OKVH01008227
104114
Bacillota
CAG
Leu
>WENV182942647
OKVH01002487
46643
Bacillota
TGA
Ser
>WENV182942625
OKVH01002244
321753
Bacillota
GCC
Gly
>WENV182942738
OKVH01004256
179755
Bacillota
CCG
Arg
>WENV182942620
OKVH01002176
58120
Bacillota
AAG
Leu
>WENV182942923
OKVH01010118
46835
Bacillota
TAA
Leu
>WENV182943077
OKVH01021776
46835
Bacillota
TAA
Leu
>WENV182942219
OKVH01000144
398832
Bacillota
TTC
Glu
>WENV182942365
OKVH01000481
398832
Bacillota
TTC
Glu
>WENV182943032
OKVH01018319
178962
Bacillota
ACG
Arg
>WENV182942934
OKVH01010513
280476
Bacillota
TTT
Lys
>WENV182943031
OKVH01017974
332651
Bacillota
GTT
Asn
>WENV182942355
OKVH01000459
398852
Bacillota
CTC
Glu
>WENV182942356
OKVH01000459
398852
Bacillota
CTC
Glu
>WENV182942357
OKVH01000459
398852
Bacillota
CTC
Glu
>WENV182942699
OKVH01003422
398852
Bacillota
CTC
Glu
>WENV182942731
OKVH01004068
321248
Bacillota
TAC
Val
>WENV182942300
OKVH01000321
280483
Bacillota
GAA
Phe
>WENV182942861
OKVH01008033
285601
Bacillota
TTC
Glu
>WENV182942814
OKVH01005999
175857
Bacillota
GTG
His
>WENV182942301
OKVH01000321
285756
Bacillota
GCC
Gly
>WENV182942434
OKVH01000740
398833
Bacillota
TGT
Thr
>WENV182942651
OKVH01002544
175849
Bacillota
GTC
Asp
>WENV182942799
OKVH01005773
405393
Bacillota
GCC
Gly
>WENV182942494
OKVH01001018
56074
Bacillota
TGA
Ser
>WENV182942798
OKVH01005755
280473
Bacillota
TGG
Pro
>WENV182942953
OKVH01011935
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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