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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182945303
OKVK01000010
157838
Bacillota
GTC
Asp
>WENV182945323
OKVK01000016
243098
Bacillota
GGT
Thr
>WENV182945327
OKVK01000019
240017
Bacillota
GCC
Gly
>WENV182945349
OKVK01000033
287000
Bacillota
GTT
Asn
>WENV182945364
OKVK01000041
169927
Bacillota
GTC
Asp
>WENV182945362
OKVK01000041
348433
Bacillota
TTC
Glu
>WENV182945402
OKVK01000072
338147
Bacillota
CTC
Glu
>WENV182945401
OKVK01000072
338147
Bacillota
CTC
Glu
>WENV182945444
OKVK01000131
274189
Bacillota
TGT
Thr
>WENV182945459
OKVK01000138
277200
Bacillota
GGC
Ala
>WENV182945474
OKVK01000167
271471
Bacillota
GCC
Gly
>WENV182945508
OKVK01000233
154063
Bacillota
CGG
Pro
>WENV182945510
OKVK01000236
196632
Bacillota
GTC
Asp
>WENV182945511
OKVK01000236
245344
Bacillota
GAA
Phe
>WENV182945559
OKVK01000372
338147
Bacillota
CTC
Glu
>WENV182945558
OKVK01000372
338147
Bacillota
CTC
Glu
>WENV182945568
OKVK01000383
152149
Bacillota
GTG
His
>WENV182945649
OKVK01000561
419639
Bacillota
GCA
Cys
>WENV182945665
OKVK01000590
271471
Bacillota
GCC
Gly
>WENV182945669
OKVK01000595
293599
Bacillota
CTT
Lys
>WENV182945673
OKVK01000636
414486
Bacillota
CCC
Gly
>WENV182945706
OKVK01000773
313454
Bacillota
GAA
Phe
>WENV182945746
OKVK01000962
338131
Bacillota
GCC
Gly
>WENV182945753
OKVK01000995
248965
Bacillota
GCC
Gly
>WENV182945759
OKVK01001036
429429
Bacillota
CCA
Trp
>WENV182945763
OKVK01001065
238974
Bacillota
GAA
Phe
>WENV182945791
OKVK01001238
293599
Bacillota
CTT
Lys
>WENV182945811
OKVK01001388
274189
Bacillota
TGT
Thr
>WENV182945873
OKVK01001931
287000
Bacillota
GTT
Asn
>WENV182945883
OKVK01002027
258936
Bacillota
GGT
Thr
>WENV182945884
OKVK01002036
37269
Bacillota
TGA
Ser
>WENV182945907
OKVK01002264
98231
Bacillota
GAG
Leu
>WENV182945925
OKVK01002446
169968
Bacillota
CAT
Met
>WENV182945937
OKVK01002698
59312
Bacillota
CAG
Leu
>WENV182945939
OKVK01002716
344240
Bacillota
GCC
Gly
>WENV182945949
OKVK01002929
155273
Bacillota
CAT
Met
>WENV182945959
OKVK01003139
162445
Bacillota
CAT
Met
>WENV182945961
OKVK01003157
338152
Bacillota
TTC
Glu
>WENV182945982
OKVK01003574
243378
Bacillota
TGG
Pro
>WENV182945989
OKVK01003885
100326
Bacillota
GTA
Tyr
>WENV182946006
OKVK01004218
419945
Bacillota
GCA
Cys
>WENV182946052
OKVK01005022
16815
Bacillota
TGA
Ser
>WENV182946060
OKVK01005223
16266
Bacillota
GCT
Ser
>WENV182946072
OKVK01005600
163943
Bacillota
GTC
Asp
>WENV182946111
OKVK01006473
344320
Bacillota
GTT
Asn
>WENV182946112
OKVK01006545
245296
Bacillota
CCC
Gly
>WENV182946162
OKVK01008052
58712
Bacillota
CAG
Leu
>WENV182946166
OKVK01008151
235098
Bacillota
GAC
Val
>WENV182946183
OKVK01008704
299139
Bacillota
TGC
Ala
>WENV182946185
OKVK01008744
37110
Bacillota
TAA
Leu
>WENV182946184
OKVK01008744
194265
Bacillota
CAT
Met
>WENV182946193
OKVK01009157
80612
Bacillota
GTA
Tyr
>WENV182946231
OKVK01010969
198135
Bacillota
GAT
Ile
>WENV182946257
OKVK01013809
37269
Bacillota
TGA
Ser
>WENV182946284
OKVK01015164
235150
Bacillota
TGC
Ala
>WENV182946288
OKVK01015350
247734
Bacillota
TGC
Ala
>WENV182946331
OKVK01019686
144594
Bacillota
CAC
Val
>WENV182946340
OKVK01020519
144967
Bacillota
GTC
Asp
>WENV182946344
OKVK01020961
44854
Bacillota
TGA
Ser
>WENV182946345
OKVK01020961
4624
Bacillota
GCT
Ser
>WENV182946359
OKVK01021889
338129
Bacillota
TGT
Thr
>WENV182946369
OKVK01022650
338149
Bacillota
CTC
Glu
>WENV182946370
OKVK01022650
144621
Bacillota
GTT
Asn
>WENV182946376
OKVK01023357
247057
Bacillota
TGC
Ala
>WENV182946389
OKVK01024974
272992
Bacillota
CTT
Lys
>WENV182946395
OKVK01025327
7065
Bacillota
GCT
Ser
>WENV182946434
OKVK01029801
41154
Bacillota
TAA
Leu
>WENV182946437
OKVK01030606
11034
Bacillota
GGA
Ser
>WENV182946459
OKVK01033534
196621
Bacillota
GTC
Asp
>WENV182946460
OKVK01033534
235095
Bacillota
GGT
Thr
>WENV182946458
OKVK01033534
235171
Bacillota
CCA
Trp
>WENV182946465
OKVK01034921
235079
Bacillota
GAA
Phe
>WENV182946473
OKVK01036761
157105
Bacillota
GAT
Ile
>WENV182946484
OKVK01038886
114075
Bacillota
TAG
Leu
>WENV182946505
OKVK01041789
411549
Bacillota
TTG
Gln
>WENV182946509
OKVK01042609
173314
Bacillota
GAT
Ile
>WENV182946568
OKVK01056225
411547
Bacillota
CTG
Gln
>WENV182946573
OKVK01057429
201704
Bacillota
GAT
Ile
>WENV182946590
OKVK01061935
158247
Bacillota
>WENV182946618
OKVK01070554
429429
Bacillota
CCA
Trp
>WENV182946635
OKVK01075691
307003
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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