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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182947344
OKVM01000028
432453
Bacillota
TTC
Glu
>WENV182947345
OKVM01000028
289715
Bacillota
TAC
Val
>WENV182947358
OKVM01000051
280547
Bacillota
GTC
Asp
>WENV182947371
OKVM01000076
20943
Bacillota
CGA
Ser
>WENV182947372
OKVM01000076
208539
Bacillota
TGG
Pro
>WENV182947373
OKVM01000076
480337
Bacillota
TCC
Gly
>WENV182947374
OKVM01000076
184539
Bacillota
TCT
Arg
>WENV182947384
OKVM01000085
141202
Bacillota
CAA
Leu
>WENV182947391
OKVM01000102
20942
Bacillota
GGA
Ser
>WENV182947392
OKVM01000102
280547
Bacillota
GTC
Asp
>WENV182947393
OKVM01000108
20932
Bacillota
GCT
Ser
>WENV182947408
OKVM01000155
289717
Bacillota
CTT
Lys
>WENV182947410
OKVM01000167
289715
Bacillota
TAC
Val
>WENV182947421
OKVM01000237
20942
Bacillota
GGA
Ser
>WENV182947424
OKVM01000254
482593
Bacillota
CCC
Gly
>WENV182947433
OKVM01000344
48505
Bacillota
TGA
Ser
>WENV182947438
OKVM01000409
508151
Bacillota
GGT
Thr
>WENV182947448
OKVM01000538
280547
Bacillota
GTC
Asp
>WENV182947449
OKVM01000538
291553
Bacillota
GAA
Phe
>WENV182947455
OKVM01000576
445407
Bacillota
GCC
Gly
>WENV182947473
OKVM01000959
119459
Bacillota
TAG
Leu
>WENV182947514
OKVM01001656
178972
Bacillota
TCT
Arg
>WENV182947520
OKVM01002046
47133
Bacillota
AAG
Leu
>WENV182947528
OKVM01002355
184537
Bacillota
ACG
Arg
>WENV182947531
OKVM01002485
289716
Bacillota
GTG
His
>WENV182947532
OKVM01002485
404091
Bacillota
TTG
Gln
>WENV182947533
OKVM01002485
289761
Bacillota
TTT
Lys
>WENV182947538
OKVM01002649
100225
Bacillota
CAG
Leu
>WENV182947540
OKVM01002658
20460
Bacillota
GCT
Ser
>WENV182947542
OKVM01002702
184086
Bacillota
GTT
Asn
>WENV182947556
OKVM01002929
289715
Bacillota
TAC
Val
>WENV182947561
OKVM01003273
332181
Bacillota
TGT
Thr
>WENV182947564
OKVM01003273
296855
Bacillota
GGT
Thr
>WENV182947565
OKVM01003273
184495
Bacillota
CAT
Met
>WENV182947569
OKVM01003591
184539
Bacillota
TCT
Arg
>WENV182947571
OKVM01003658
283762
Bacillota
CCT
Arg
>WENV182947572
OKVM01003700
283761
Bacillota
CGT
Thr
>WENV182947584
OKVM01003969
195967
Bacillota
CAT
Met
>WENV182947589
OKVM01004182
400614
Bacillota
CCG
Arg
>WENV182947591
OKVM01004328
289713
Bacillota
TGT
Thr
>WENV182947593
OKVM01004715
445407
Bacillota
GCC
Gly
>WENV182947594
OKVM01004715
408526
Bacillota
GCA
Cys
>WENV182947605
OKVM01004929
184495
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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