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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182963129
OKWP01000432
20221
Bacillota
>WENV182963104
OKWP01000277
398916
Bacillota
>WENV182963140
OKWP01000490
178162
Bacillota
>WENV182963091
OKWP01000267
142210
Bacillota
>WENV182963092
OKWP01000269
1287
Bacillota
>WENV182963152
OKWP01000618
184537
Bacillota
ACG
Arg
>WENV182963141
OKWP01000494
176087
Bacillota
ACG
Arg
>WENV182963118
OKWP01000349
56095
Bacillota
CAA
Leu
>WENV182963116
OKWP01000330
141202
Bacillota
CAA
Leu
>WENV182963138
OKWP01000447
184495
Bacillota
CAT
Met
>WENV182963083
OKWP01000222
482593
Bacillota
CCC
Gly
>WENV182963063
OKWP01000164
20943
Bacillota
CGA
Ser
>WENV182963032
OKWP01000098
20570
Bacillota
CGA
Ser
>WENV182962967
OKWP01000042
314710
Bacillota
CGT
Thr
>WENV182963113
OKWP01000311
289717
Bacillota
CTT
Lys
>WENV182963185
OKWP01000973
291553
Bacillota
GAA
Phe
>WENV182963208
OKWP01001080
320075
Bacillota
GAA
Phe
>WENV182963088
OKWP01000253
408526
Bacillota
GCA
Cys
>WENV182963096
OKWP01000277
480360
Bacillota
GCA
Cys
>WENV182962962
OKWP01000036
20932
Bacillota
GCT
Ser
>WENV182963157
OKWP01000665
13228
Bacillota
GGA
Ser
>WENV182963067
OKWP01000169
20942
Bacillota
GGA
Ser
>WENV182963137
OKWP01000447
296855
Bacillota
GGT
Thr
>WENV182963103
OKWP01000277
195133
Bacillota
GTC
Asp
>WENV182963068
OKWP01000169
280547
Bacillota
GTC
Asp
>WENV182963184
OKWP01000973
280547
Bacillota
GTC
Asp
>WENV182963223
OKWP01001326
280547
Bacillota
GTC
Asp
>WENV182963175
OKWP01000925
289716
Bacillota
GTG
His
>WENV182963131
OKWP01000447
333281
Bacillota
GTT
Asn
>WENV182963142
OKWP01000494
280640
Bacillota
TAC
Val
>WENV182963002
OKWP01000067
289715
Bacillota
TAC
Val
>WENV182963029
OKWP01000094
289715
Bacillota
TAC
Val
>WENV182963133
OKWP01000447
289715
Bacillota
TAC
Val
>WENV182963153
OKWP01000618
119459
Bacillota
TAG
Leu
>WENV182963065
OKWP01000164
480337
Bacillota
TCC
Gly
>WENV182963105
OKWP01000277
176014
Bacillota
TCT
Arg
>WENV182963066
OKWP01000164
184539
Bacillota
TCT
Arg
>WENV182963070
OKWP01000174
48505
Bacillota
TGA
Ser
>WENV182963064
OKWP01000164
208539
Bacillota
TGG
Pro
>WENV182963122
OKWP01000376
418726
Bacillota
TGT
Thr
>WENV182963134
OKWP01000447
289713
Bacillota
TGT
Thr
>WENV182963132
OKWP01000447
432453
Bacillota
TTC
Glu
>WENV182963176
OKWP01000925
404091
Bacillota
TTG
Gln
>WENV182963177
OKWP01000925
289761
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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