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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182974452
OKXQ01002510
16842
Bacillota
CGA
Ser
>WENV182974313
OKXQ01000072
144612
Bacillota
TCT
Arg
>WENV182974386
OKXQ01000309
235098
Bacillota
GAC
Val
>WENV182974325
OKXQ01000115
44854
Bacillota
TGA
Ser
>WENV182974481
OKXQ01006769
144668
Bacillota
GTC
Asp
>WENV182974333
OKXQ01000134
182792
Bacillota
GTC
Asp
>WENV182974443
OKXQ01001755
16834
Bacillota
GCT
Ser
>WENV182974298
OKXQ01000040
11034
Bacillota
GGA
Ser
>WENV182974496
OKXQ01008584
37437
Bacillota
TAA
Leu
>WENV182974425
OKXQ01000807
235079
Bacillota
GAA
Phe
>WENV182974286
OKXQ01000029
338149
Bacillota
CTC
Glu
>WENV182974348
OKXQ01000159
245298
Bacillota
CGG
Pro
>WENV182974356
OKXQ01000183
411547
Bacillota
CTG
Gln
>WENV182974347
OKXQ01000159
411547
Bacillota
CTG
Gln
>WENV182974326
OKXQ01000115
4624
Bacillota
GCT
Ser
>WENV182974497
OKXQ01008948
342895
Bacillota
CAT
Met
>WENV182974335
OKXQ01000147
235095
Bacillota
GGT
Thr
>WENV182974334
OKXQ01000134
235095
Bacillota
GGT
Thr
>WENV182974457
OKXQ01003065
250349
Bacillota
GAA
Phe
>WENV182974346
OKXQ01000159
411549
Bacillota
TTG
Gln
>WENV182974435
OKXQ01001135
235701
Bacillota
TTT
Lys
>WENV182974327
OKXQ01000118
148188
Bacillota
CCG
Arg
>WENV182974420
OKXQ01000746
80612
Bacillota
GTA
Tyr
>WENV182974487
OKXQ01007559
235127
Bacillota
TTT
Lys
>WENV182974456
OKXQ01003065
235197
Bacillota
GTC
Asp
>WENV182974475
OKXQ01005745
368876
Bacillota
GCC
Gly
>WENV182974387
OKXQ01000316
235124
Bacillota
TGG
Pro
>WENV182974463
OKXQ01003669
338129
Bacillota
TGT
Thr
>WENV182974433
OKXQ01001135
243613
Bacillota
GTG
His
>WENV182974320
OKXQ01000093
144583
Bacillota
ACG
Arg
>WENV182974332
OKXQ01000134
235171
Bacillota
CCA
Trp
>WENV182974399
OKXQ01000475
144621
Bacillota
GTT
Asn
>WENV182974287
OKXQ01000029
144621
Bacillota
GTT
Asn
>WENV182974412
OKXQ01000616
152491
Bacillota
CAT
Met
>WENV182974396
OKXQ01000428
58712
Bacillota
CAG
Leu
>WENV182974350
OKXQ01000164
245296
Bacillota
CCC
Gly
>WENV182974448
OKXQ01002195
272992
Bacillota
CTT
Lys
>WENV182974408
OKXQ01000616
273029
Bacillota
TGT
Thr
>WENV182974411
OKXQ01000616
281472
Bacillota
GGT
Thr
>WENV182974473
OKXQ01005329
178024
Bacillota
TCT
Arg
>WENV182974372
OKXQ01000236
144594
Bacillota
CAC
Val
>WENV182974434
OKXQ01001135
343027
Bacillota
TTG
Gln
>WENV182974390
OKXQ01000355
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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