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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182999020
OLBW01001197
56079
Bacillota
AAG
Leu
>WENV182999012
OLBW01000647
190476
Bacillota
CAT
Met
>WENV182998994
OLBW01000314
291576
Bacillota
CCC
Gly
>WENV182999057
OLBW01005689
179755
Bacillota
CCG
Arg
>WENV182999023
OLBW01001214
291581
Bacillota
CGG
Pro
>WENV182999038
OLBW01002534
398854
Bacillota
CTC
Glu
>WENV182998999
OLBW01000456
398852
Bacillota
CTC
Glu
>WENV182999022
OLBW01001214
480322
Bacillota
CTG
Gln
>WENV182998998
OLBW01000427
280492
Bacillota
CTT
Lys
>WENV182998983
OLBW01000028
280462
Bacillota
GAA
Phe
>WENV182999004
OLBW01000544
280447
Bacillota
GAC
Val
>WENV182999009
OLBW01000559
405363
Bacillota
GCA
Cys
>WENV182999035
OLBW01002088
5692
Bacillota
GCT
Ser
>WENV182999056
OLBW01005430
117745
Bacillota
GTA
Tyr
>WENV182999007
OLBW01000559
175849
Bacillota
GTC
Asp
>WENV182999039
OLBW01002534
175868
Bacillota
GTT
Asn
>WENV182999066
OLBW01009186
175859
Bacillota
TCT
Arg
>WENV182999034
OLBW01002088
56074
Bacillota
TGA
Ser
>WENV182999053
OLBW01004992
280473
Bacillota
TGG
Pro
>WENV182999013
OLBW01000647
398832
Bacillota
TTC
Glu
>WENV182998984
OLBW01000028
280463
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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