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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183004437
OLCV01000717
99852
Bacillota
GTA
Tyr
>WENV183004512
OLCV01004123
349107
Bacillota
GCC
Gly
>WENV183004486
OLCV01002724
405363
Bacillota
GCA
Cys
>WENV183004339
OLCV01000009
280428
Bacillota
GAA
Phe
>WENV183004513
OLCV01004123
280466
Bacillota
TAC
Val
>WENV183004676
OLCV01030877
280492
Bacillota
CTT
Lys
>WENV183004459
OLCV01001426
175842
Bacillota
CAC
Val
>WENV183004522
OLCV01004792
228119
Bacillota
TCT
Arg
>WENV183004554
OLCV01006753
406553
Bacillota
TTG
Gln
>WENV183004658
OLCV01026465
215243
Bacillota
CAT
Met
>WENV183004421
OLCV01000399
280447
Bacillota
GAC
Val
>WENV183004441
OLCV01000869
280447
Bacillota
GAC
Val
>WENV183004543
OLCV01006188
186123
Bacillota
GTC
Asp
>WENV183004337
OLCV01000009
280427
Bacillota
TAC
Val
>WENV183004659
OLCV01026465
460732
Bacillota
TTC
Glu
>WENV183004428
OLCV01000533
291581
Bacillota
CGG
Pro
>WENV183004416
OLCV01000313
175831
Bacillota
ACG
Arg
>WENV183004592
OLCV01013006
332181
Bacillota
TGT
Thr
>WENV183004544
OLCV01006188
291634
Bacillota
GAA
Phe
>WENV183004550
OLCV01006655
346451
Bacillota
TTT
Lys
>WENV183004424
OLCV01000486
480322
Bacillota
CTG
Gln
>WENV183004427
OLCV01000533
480322
Bacillota
CTG
Gln
>WENV183004415
OLCV01000308
175868
Bacillota
GTT
Asn
>WENV183004443
OLCV01000897
175868
Bacillota
GTT
Asn
>WENV183004497
OLCV01003065
291576
Bacillota
CCC
Gly
>WENV183004563
OLCV01008294
398857
Bacillota
TTC
Glu
>WENV183004668
OLCV01027973
117745
Bacillota
GTA
Tyr
>WENV183004606
OLCV01014161
280444
Bacillota
GGT
Thr
>WENV183004637
OLCV01021164
483485
Bacillota
CCC
Gly
>WENV183004575
OLCV01010405
291597
Bacillota
TGC
Ala
>WENV183004450
OLCV01001126
179755
Bacillota
CCG
Arg
>WENV183004548
OLCV01006587
179755
Bacillota
CCG
Arg
>WENV183004595
OLCV01013006
289123
Bacillota
GGT
Thr
>WENV183004454
OLCV01001260
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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