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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183009846
OLDS01000419
73009
Bacillota
CAG
Leu
>WENV183009852
OLDS01000553
321753
Bacillota
GCC
Gly
>WENV183009853
OLDS01000553
280466
Bacillota
TAC
Val
>WENV183009854
OLDS01000553
175849
Bacillota
GTC
Asp
>WENV183009855
OLDS01000553
280444
Bacillota
GGT
Thr
>WENV183009890
OLDS01001392
280473
Bacillota
TGG
Pro
>WENV183009891
OLDS01001429
398833
Bacillota
TGT
Thr
>WENV183009893
OLDS01001492
398854
Bacillota
CTC
Glu
>WENV183009894
OLDS01001492
175868
Bacillota
GTT
Asn
>WENV183009895
OLDS01001506
179755
Bacillota
CCG
Arg
>WENV183009896
OLDS01001551
175842
Bacillota
CAC
Val
>WENV183009901
OLDS01001614
175911
Bacillota
GTC
Asp
>WENV183009903
OLDS01001638
56074
Bacillota
TGA
Ser
>WENV183009904
OLDS01001638
5692
Bacillota
GCT
Ser
>WENV183009910
OLDS01001825
190476
Bacillota
CAT
Met
>WENV183009911
OLDS01001825
398832
Bacillota
TTC
Glu
>WENV183009915
OLDS01001903
280447
Bacillota
GAC
Val
>WENV183009921
OLDS01001971
280428
Bacillota
GAA
Phe
>WENV183009925
OLDS01002121
480322
Bacillota
CTG
Gln
>WENV183009926
OLDS01002121
291581
Bacillota
CGG
Pro
>WENV183009932
OLDS01002611
175831
Bacillota
ACG
Arg
>WENV183009936
OLDS01002752
322848
Bacillota
CTT
Lys
>WENV183009945
OLDS01002997
201856
Bacillota
GAT
Ile
>WENV183009959
OLDS01003915
480324
Bacillota
TTG
Gln
>WENV183009969
OLDS01004677
291576
Bacillota
CCC
Gly
>WENV183009989
OLDS01006600
186051
Bacillota
GAT
Ile
>WENV183009996
OLDS01006923
321248
Bacillota
TAC
Val
>WENV183009999
OLDS01007691
284723
Bacillota
TAC
Val
>WENV183010008
OLDS01008920
400963
Bacillota
GTT
Asn
>WENV183010015
OLDS01009340
175859
Bacillota
TCT
Arg
>WENV183010027
OLDS01012422
405363
Bacillota
GCA
Cys
>WENV183010040
OLDS01016034
312274
Bacillota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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