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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183012990
OLEE01011491
56079
Bacillota
AAG
Leu
>WENV183012856
OLEE01000604
175831
Bacillota
ACG
Arg
>WENV183012794
OLEE01000100
73009
Bacillota
CAG
Leu
>WENV183012869
OLEE01000732
190476
Bacillota
CAT
Met
>WENV183013019
OLEE01016681
497729
Bacillota
CCA
Trp
>WENV183012951
OLEE01004839
291576
Bacillota
CCC
Gly
>WENV183012844
OLEE01000404
179755
Bacillota
CCG
Arg
>WENV183012873
OLEE01000837
398854
Bacillota
CTC
Glu
>WENV183012980
OLEE01009716
398852
Bacillota
CTC
Glu
>WENV183012840
OLEE01000351
480322
Bacillota
CTG
Gln
>WENV183013039
OLEE01019464
280492
Bacillota
CTT
Lys
>WENV183012832
OLEE01000312
280428
Bacillota
GAA
Phe
>WENV183012877
OLEE01000871
284627
Bacillota
GAA
Phe
>WENV183012956
OLEE01005465
280462
Bacillota
GAA
Phe
>WENV183012847
OLEE01000490
405363
Bacillota
GCA
Cys
>WENV183012934
OLEE01003038
343590
Bacillota
GCC
Gly
>WENV183012833
OLEE01000312
349107
Bacillota
GCC
Gly
>WENV183012884
OLEE01000937
5692
Bacillota
GCT
Ser
>WENV183013060
OLEE01026724
184497
Bacillota
GGG
Pro
>WENV183012812
OLEE01000177
280444
Bacillota
GGT
Thr
>WENV183012859
OLEE01000631
280444
Bacillota
GGT
Thr
>WENV183012900
OLEE01001419
117745
Bacillota
GTA
Tyr
>WENV183012858
OLEE01000631
175849
Bacillota
GTC
Asp
>WENV183012902
OLEE01001646
175868
Bacillota
GTT
Asn
>WENV183012927
OLEE01002740
46835
Bacillota
TAA
Leu
>WENV183013040
OLEE01019573
290391
Bacillota
TAC
Val
>WENV183012926
OLEE01002740
294020
Bacillota
TAC
Val
>WENV183012937
OLEE01003340
175859
Bacillota
TCT
Arg
>WENV183012883
OLEE01000937
56074
Bacillota
TGA
Ser
>WENV183012901
OLEE01001458
280473
Bacillota
TGG
Pro
>WENV183012946
OLEE01004175
398833
Bacillota
TGT
Thr
>WENV183012898
OLEE01001419
398857
Bacillota
TTC
Glu
>WENV183012870
OLEE01000732
398832
Bacillota
TTC
Glu
>WENV183012940
OLEE01003340
280463
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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