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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183066232
OLIK01022907
196621
Bacillota
GTC
Asp
>WENV183066231
OLIK01022797
16842
Bacillota
CGA
Ser
>WENV183066117
OLIK01005721
309417
Bacillota
GGC
Ala
>WENV183066141
OLIK01008354
144612
Bacillota
TCT
Arg
>WENV183066047
OLIK01001887
235098
Bacillota
GAC
Val
>WENV183066181
OLIK01012021
44854
Bacillota
TGA
Ser
>WENV183066081
OLIK01003382
235154
Bacillota
GTT
Asn
>WENV183065975
OLIK01000362
144577
Bacillota
GAT
Ile
>WENV183066067
OLIK01003083
37071
Bacillota
TGA
Ser
>WENV183066233
OLIK01022907
304022
Bacillota
GCC
Gly
>WENV183066111
OLIK01005378
338147
Bacillota
CTC
Glu
>WENV183066016
OLIK01001096
235137
Bacillota
TGC
Ala
>WENV183066256
OLIK01027174
235114
Bacillota
TTT
Lys
>WENV183066237
OLIK01024912
429429
Bacillota
CCA
Trp
>WENV183066110
OLIK01005029
44859
Bacillota
AAG
Leu
>WENV183066246
OLIK01025604
16834
Bacillota
GCT
Ser
>WENV183066191
OLIK01013021
11034
Bacillota
GGA
Ser
>WENV183065974
OLIK01000362
235087
Bacillota
TGC
Ala
>WENV183066113
OLIK01005571
338149
Bacillota
CTC
Glu
>WENV183066156
OLIK01009661
287000
Bacillota
GTT
Asn
>WENV183066254
OLIK01027174
144610
Bacillota
GTG
His
>WENV183066135
OLIK01007785
411547
Bacillota
CTG
Gln
>WENV183066182
OLIK01012021
4624
Bacillota
GCT
Ser
>WENV183066188
OLIK01012673
235095
Bacillota
GGT
Thr
>WENV183066216
OLIK01018220
194150
Bacillota
TGG
Pro
>WENV183066127
OLIK01006591
411549
Bacillota
TTG
Gln
>WENV183066214
OLIK01017733
59296
Bacillota
AAG
Leu
>WENV183066089
OLIK01003450
148188
Bacillota
CCG
Arg
>WENV183066221
OLIK01019123
144583
Bacillota
ACG
Arg
>WENV183066086
OLIK01003382
235113
Bacillota
GAA
Phe
>WENV183066107
OLIK01004837
58712
Bacillota
CAG
Leu
>WENV183066084
OLIK01003382
95563
Bacillota
GTA
Tyr
>WENV183066250
OLIK01026538
338131
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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