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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183077270
OLIW01028257
99852
Bacillota
GTA
Tyr
>WENV183077427
OLIW01044323
343590
Bacillota
GCC
Gly
>WENV183077667
OLIW01087089
343590
Bacillota
GCC
Gly
>WENV183077543
OLIW01060426
280500
Bacillota
TGC
Ala
>WENV183076840
OLIW01010537
349107
Bacillota
GCC
Gly
>WENV183075545
OLIW01000145
290391
Bacillota
TAC
Val
>WENV183076839
OLIW01010537
280428
Bacillota
GAA
Phe
>WENV183076664
OLIW01007311
405357
Bacillota
TTC
Glu
>WENV183076479
OLIW01004264
291579
Bacillota
GAA
Phe
>WENV183075842
OLIW01000596
280492
Bacillota
CTT
Lys
>WENV183075952
OLIW01000917
280492
Bacillota
CTT
Lys
>WENV183076804
OLIW01009945
175842
Bacillota
CAC
Val
>WENV183075885
OLIW01000703
184497
Bacillota
GGG
Pro
>WENV183075899
OLIW01000743
184497
Bacillota
GGG
Pro
>WENV183076410
OLIW01003553
184497
Bacillota
GGG
Pro
>WENV183075692
OLIW01000312
179176
Bacillota
ACG
Arg
>WENV183075723
OLIW01000361
179176
Bacillota
ACG
Arg
>WENV183077670
OLIW01087822
352588
Bacillota
CAT
Met
>WENV183077308
OLIW01030959
190476
Bacillota
CAT
Met
>WENV183076272
OLIW01002393
73664
Bacillota
CAG
Leu
>WENV183076396
OLIW01003395
280447
Bacillota
GAC
Val
>WENV183077151
OLIW01021334
5692
Bacillota
GCT
Ser
>WENV183076307
OLIW01002681
481217
Bacillota
GCA
Cys
>WENV183076485
OLIW01004337
175859
Bacillota
TCT
Arg
>WENV183077294
OLIW01029757
398835
Bacillota
GCC
Gly
>WENV183075508
OLIW01000101
290325
Bacillota
GCC
Gly
>WENV183075918
OLIW01000803
192086
Bacillota
TGG
Pro
>WENV183075873
OLIW01000680
27216
Bacillota
GCT
Ser
>WENV183077373
OLIW01037623
480322
Bacillota
CTG
Gln
>WENV183077261
OLIW01027452
175868
Bacillota
GTT
Asn
>WENV183077267
OLIW01028128
314834
Bacillota
TGC
Ala
>WENV183077165
OLIW01021879
322848
Bacillota
CTT
Lys
>WENV183077260
OLIW01027452
398854
Bacillota
CTC
Glu
>WENV183077576
OLIW01066427
291576
Bacillota
CCC
Gly
>WENV183077414
OLIW01043083
480324
Bacillota
TTG
Gln
>WENV183076245
OLIW01002209
497729
Bacillota
CCA
Trp
>WENV183076894
OLIW01011887
497729
Bacillota
CCA
Trp
>WENV183075848
OLIW01000601
407858
Bacillota
GCC
Gly
>WENV183077033
OLIW01016630
407858
Bacillota
GCC
Gly
>WENV183076038
OLIW01001209
303718
Bacillota
TGT
Thr
>WENV183076527
OLIW01004683
303718
Bacillota
TGT
Thr
>WENV183076532
OLIW01004776
323864
Bacillota
TGC
Ala
>WENV183076203
OLIW01001998
117745
Bacillota
GTA
Tyr
>WENV183077583
OLIW01067658
280444
Bacillota
GGT
Thr
>WENV183077238
OLIW01025820
317482
Bacillota
TAC
Val
>WENV183077630
OLIW01077506
291597
Bacillota
TGC
Ala
>WENV183076181
OLIW01001888
46643
Bacillota
TGA
Ser
>WENV183076327
OLIW01002776
342104
Bacillota
TAC
Val
>WENV183077354
OLIW01035375
179755
Bacillota
CCG
Arg
>WENV183075828
OLIW01000556
58120
Bacillota
AAG
Leu
>WENV183076209
OLIW01002015
58120
Bacillota
AAG
Leu
>WENV183076210
OLIW01002015
58120
Bacillota
AAG
Leu
>WENV183076900
OLIW01012008
46835
Bacillota
TAA
Leu
>WENV183076141
OLIW01001673
398832
Bacillota
TTC
Glu
>WENV183077309
OLIW01030959
398832
Bacillota
TTC
Glu
>WENV183077296
OLIW01030147
118669
Bacillota
GTA
Tyr
>WENV183075608
OLIW01000177
52748
Bacillota
TGA
Ser
>WENV183075933
OLIW01000855
280462
Bacillota
GAA
Phe
>WENV183075946
OLIW01000899
398852
Bacillota
CTC
Glu
>WENV183076090
OLIW01001389
398852
Bacillota
CTC
Glu
>WENV183076091
OLIW01001389
398852
Bacillota
CTC
Glu
>WENV183076092
OLIW01001389
398852
Bacillota
CTC
Glu
>WENV183076254
OLIW01002278
398852
Bacillota
CTC
Glu
>WENV183076280
OLIW01002456
398852
Bacillota
CTC
Glu
>WENV183077512
OLIW01055306
201856
Bacillota
GAT
Ile
>WENV183075666
OLIW01000257
280483
Bacillota
GAA
Phe
>WENV183076582
OLIW01005476
298260
Bacillota
GTT
Asn
>WENV183075667
OLIW01000257
285756
Bacillota
GCC
Gly
>WENV183077582
OLIW01067658
175849
Bacillota
GTC
Asp
>WENV183076452
OLIW01003966
280463
Bacillota
TTT
Lys
>WENV183077150
OLIW01021334
56074
Bacillota
TGA
Ser
>WENV183077467
OLIW01048790
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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