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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183087824
OLJO01002980
354367
Bacillota
TTG
Gln
>WENV183087771
OLJO01000447
371854
Bacillota
GTT
Asn
>WENV183087783
OLJO01000784
154766
Bacillota
GTC
Asp
>WENV183087826
OLJO01002980
113680
Bacillota
TAG
Leu
>WENV183087825
OLJO01002980
235903
Bacillota
TTT
Lys
>WENV183087772
OLJO01000472
258936
Bacillota
GGT
Thr
>WENV183087769
OLJO01000447
353537
Bacillota
GTT
Asn
>WENV183087770
OLJO01000447
339362
Bacillota
GTT
Asn
>WENV183087823
OLJO01002980
279635
Bacillota
GTG
His
>WENV183087831
OLJO01003549
23575
Bacillota
GGA
Ser
>WENV183087829
OLJO01002980
145383
Bacillota
TCT
Arg
>WENV183087764
OLJO01000202
292012
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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