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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183134769
OLOD01002755
24650
Bacillota
TAA
Leu
>WENV183134833
OLOD01003950
144612
Bacillota
TCT
Arg
>WENV183134703
OLOD01001878
267649
Bacillota
TAC
Val
>WENV183134396
OLOD01000204
338152
Bacillota
TTC
Glu
>WENV183134498
OLOD01000475
235154
Bacillota
GTT
Asn
>WENV183135065
OLOD01016901
149125
Bacillota
TCT
Arg
>WENV183135136
OLOD01027957
304022
Bacillota
GCC
Gly
>WENV183134958
OLOD01008962
307003
Bacillota
TGC
Ala
>WENV183134631
OLOD01001300
59312
Bacillota
CAG
Leu
>WENV183134239
OLOD01000003
59312
Bacillota
CAG
Leu
>WENV183134591
OLOD01000997
238910
Bacillota
CTT
Lys
>WENV183134464
OLOD01000400
338147
Bacillota
CTC
Glu
>WENV183134246
OLOD01000011
338147
Bacillota
CTC
Glu
>WENV183134749
OLOD01002641
340802
Bacillota
TTG
Gln
>WENV183135165
OLOD01034113
293599
Bacillota
CTT
Lys
>WENV183134987
OLOD01010542
281701
Bacillota
TGC
Ala
>WENV183134985
OLOD01010177
338143
Bacillota
CTC
Glu
>WENV183134779
OLOD01002883
429429
Bacillota
CCA
Trp
>WENV183134577
OLOD01000830
429429
Bacillota
CCA
Trp
>WENV183134527
OLOD01000541
429429
Bacillota
CCA
Trp
>WENV183134610
OLOD01001188
313454
Bacillota
GAA
Phe
>WENV183134466
OLOD01000412
313454
Bacillota
GAA
Phe
>WENV183134772
OLOD01002798
41154
Bacillota
TAA
Leu
>WENV183134630
OLOD01001300
44859
Bacillota
AAG
Leu
>WENV183134245
OLOD01000008
44859
Bacillota
AAG
Leu
>WENV183135123
OLOD01024080
247057
Bacillota
TGC
Ala
>WENV183134873
OLOD01005072
235079
Bacillota
GAA
Phe
>WENV183134991
OLOD01010597
114440
Bacillota
TAG
Leu
>WENV183134308
OLOD01000070
149041
Bacillota
GTC
Asp
>WENV183134581
OLOD01000887
37269
Bacillota
TGA
Ser
>WENV183134321
OLOD01000076
37269
Bacillota
TGA
Ser
>WENV183135098
OLOD01021798
155089
Bacillota
CAT
Met
>WENV183134965
OLOD01009359
287000
Bacillota
GTT
Asn
>WENV183134929
OLOD01008058
287000
Bacillota
GTT
Asn
>WENV183134989
OLOD01010579
348433
Bacillota
TTC
Glu
>WENV183134672
OLOD01001595
162445
Bacillota
CAT
Met
>WENV183134435
OLOD01000296
162445
Bacillota
CAT
Met
>WENV183135120
OLOD01023677
201704
Bacillota
GAT
Ile
>WENV183134472
OLOD01000422
152492
Bacillota
GGG
Pro
>WENV183134399
OLOD01000205
152492
Bacillota
GGG
Pro
>WENV183134390
OLOD01000195
152492
Bacillota
GGG
Pro
>WENV183134748
OLOD01002641
144610
Bacillota
GTG
His
>WENV183134614
OLOD01001196
147684
Bacillota
ACG
Arg
>WENV183134599
OLOD01001037
147684
Bacillota
ACG
Arg
>WENV183134563
OLOD01000750
147684
Bacillota
ACG
Arg
>WENV183135044
OLOD01014422
412387
Bacillota
GCA
Cys
>WENV183134825
OLOD01003829
412387
Bacillota
GCA
Cys
>WENV183134596
OLOD01001024
412387
Bacillota
GCA
Cys
>WENV183134397
OLOD01000204
412387
Bacillota
GCA
Cys
>WENV183134551
OLOD01000665
313164
Bacillota
TTT
Lys
>WENV183134549
OLOD01000665
313164
Bacillota
TTT
Lys
>WENV183134310
OLOD01000070
239832
Bacillota
TGT
Thr
>WENV183134507
OLOD01000485
235142
Bacillota
CTT
Lys
>WENV183134488
OLOD01000451
235142
Bacillota
CTT
Lys
>WENV183134509
OLOD01000495
59296
Bacillota
AAG
Leu
>WENV183134429
OLOD01000287
148188
Bacillota
CCG
Arg
>WENV183134878
OLOD01005164
298639
Bacillota
GTT
Asn
>WENV183134514
OLOD01000498
235127
Bacillota
TTT
Lys
>WENV183134979
OLOD01009906
147674
Bacillota
TCT
Arg
>WENV183134512
OLOD01000497
157838
Bacillota
GTC
Asp
>WENV183134403
OLOD01000215
247734
Bacillota
TGC
Ala
>WENV183134241
OLOD01000003
419877
Bacillota
TCC
Gly
>WENV183134359
OLOD01000130
235113
Bacillota
GAA
Phe
>WENV183135078
OLOD01018585
21693
Bacillota
GCT
Ser
>WENV183134747
OLOD01002641
157635
Bacillota
TCT
Arg
>WENV183134882
OLOD01005419
414486
Bacillota
CCC
Gly
>WENV183135070
OLOD01017736
272488
Bacillota
GAA
Phe
>WENV183134676
OLOD01001630
272488
Bacillota
GAA
Phe
>WENV183134573
OLOD01000807
272488
Bacillota
GAA
Phe
>WENV183134518
OLOD01000519
119513
Bacillota
CAA
Leu
>WENV183134555
OLOD01000695
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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