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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
94 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183153107
OLOQ01039526
56079
Bacillota
AAG
Leu
>WENV183152132
OLOQ01002491
179176
Bacillota
ACG
Arg
>WENV183152753
OLOQ01012579
179176
Bacillota
ACG
Arg
>WENV183151895
OLOQ01001121
179176
Bacillota
ACG
Arg
>WENV183152397
OLOQ01004613
175831
Bacillota
ACG
Arg
>WENV183151983
OLOQ01001512
175842
Bacillota
CAC
Val
>WENV183151876
OLOQ01001053
73664
Bacillota
CAG
Leu
>WENV183152801
OLOQ01014471
73664
Bacillota
CAG
Leu
>WENV183152423
OLOQ01005035
73009
Bacillota
CAG
Leu
>WENV183152555
OLOQ01007302
73009
Bacillota
CAG
Leu
>WENV183153040
OLOQ01030479
73009
Bacillota
CAG
Leu
>WENV183151901
OLOQ01001138
238915
Bacillota
CAT
Met
>WENV183151896
OLOQ01001122
190476
Bacillota
CAT
Met
>WENV183153058
OLOQ01033474
190476
Bacillota
CAT
Met
>WENV183153188
OLOQ01052505
187589
Bacillota
CAT
Met
>WENV183152784
OLOQ01013573
187364
Bacillota
CAT
Met
>WENV183152477
OLOQ01005694
284506
Bacillota
CCA
Trp
>WENV183151616
OLOQ01000354
497729
Bacillota
CCA
Trp
>WENV183151760
OLOQ01000667
497729
Bacillota
CCA
Trp
>WENV183152428
OLOQ01005077
291576
Bacillota
CCC
Gly
>WENV183152578
OLOQ01007576
291576
Bacillota
CCC
Gly
>WENV183152781
OLOQ01013413
483485
Bacillota
CCC
Gly
>WENV183152201
OLOQ01002882
179755
Bacillota
CCG
Arg
>WENV183152519
OLOQ01006566
179755
Bacillota
CCG
Arg
>WENV183152704
OLOQ01010949
179755
Bacillota
CCG
Arg
>WENV183152341
OLOQ01004096
291581
Bacillota
CGG
Pro
>WENV183152388
OLOQ01004479
398854
Bacillota
CTC
Glu
>WENV183152525
OLOQ01006735
398854
Bacillota
CTC
Glu
>WENV183152740
OLOQ01012126
398854
Bacillota
CTC
Glu
>WENV183151284
OLOQ01000007
398852
Bacillota
CTC
Glu
>WENV183151285
OLOQ01000007
398852
Bacillota
CTC
Glu
>WENV183151286
OLOQ01000007
398852
Bacillota
CTC
Glu
>WENV183152340
OLOQ01004096
480322
Bacillota
CTG
Gln
>WENV183152739
OLOQ01012087
280492
Bacillota
CTT
Lys
>WENV183152527
OLOQ01006763
330413
Bacillota
CTT
Lys
>WENV183153244
OLOQ01066213
377363
Bacillota
GAA
Phe
>WENV183152381
OLOQ01004425
280428
Bacillota
GAA
Phe
>WENV183151339
OLOQ01000046
302145
Bacillota
GAA
Phe
>WENV183152180
OLOQ01002736
280483
Bacillota
GAA
Phe
>WENV183151654
OLOQ01000435
280447
Bacillota
GAC
Val
>WENV183152498
OLOQ01006058
280447
Bacillota
GAC
Val
>WENV183152892
OLOQ01018044
179563
Bacillota
GAT
Ile
>WENV183152884
OLOQ01017317
175825
Bacillota
GAT
Ile
>WENV183153125
OLOQ01043741
189473
Bacillota
GAT
Ile
>WENV183153210
OLOQ01055495
201856
Bacillota
GAT
Ile
>WENV183152786
OLOQ01013766
405363
Bacillota
GCA
Cys
>WENV183151981
OLOQ01001502
481217
Bacillota
GCA
Cys
>WENV183153118
OLOQ01042854
484479
Bacillota
GCA
Cys
>WENV183152324
OLOQ01003837
343590
Bacillota
GCC
Gly
>WENV183153004
OLOQ01026992
343590
Bacillota
GCC
Gly
>WENV183152382
OLOQ01004425
349107
Bacillota
GCC
Gly
>WENV183152974
OLOQ01024301
349107
Bacillota
GCC
Gly
>WENV183151733
OLOQ01000605
285756
Bacillota
GCC
Gly
>WENV183152181
OLOQ01002736
285756
Bacillota
GCC
Gly
>WENV183152810
OLOQ01014770
5692
Bacillota
GCT
Ser
>WENV183152874
OLOQ01017146
21311
Bacillota
GCT
Ser
>WENV183151824
OLOQ01000864
184497
Bacillota
GGG
Pro
>WENV183152290
OLOQ01003732
280444
Bacillota
GGT
Thr
>WENV183152472
OLOQ01005635
280444
Bacillota
GGT
Thr
>WENV183153047
OLOQ01031580
99852
Bacillota
GTA
Tyr
>WENV183152429
OLOQ01005105
118669
Bacillota
GTA
Tyr
>WENV183152992
OLOQ01026015
229487
Bacillota
GTC
Asp
>WENV183152214
OLOQ01003040
175857
Bacillota
GTG
His
>WENV183152389
OLOQ01004479
175868
Bacillota
GTT
Asn
>WENV183152526
OLOQ01006735
175868
Bacillota
GTT
Asn
>WENV183152741
OLOQ01012126
175868
Bacillota
GTT
Asn
>WENV183153195
OLOQ01052967
46774
Bacillota
TAA
Leu
>WENV183152401
OLOQ01004654
46835
Bacillota
TAA
Leu
>WENV183151461
OLOQ01000149
323166
Bacillota
TAC
Val
>WENV183153104
OLOQ01039003
176014
Bacillota
TCT
Arg
>WENV183152113
OLOQ01002344
175859
Bacillota
TCT
Arg
>WENV183151958
OLOQ01001420
52748
Bacillota
TGA
Ser
>WENV183152809
OLOQ01014770
56074
Bacillota
TGA
Ser
>WENV183153256
OLOQ01070606
280500
Bacillota
TGC
Ala
>WENV183152891
OLOQ01018044
353153
Bacillota
TGC
Ala
>WENV183152787
OLOQ01013947
323864
Bacillota
TGC
Ala
>WENV183153137
OLOQ01045141
291597
Bacillota
TGC
Ala
>WENV183151886
OLOQ01001089
280473
Bacillota
TGG
Pro
>WENV183152281
OLOQ01003542
280473
Bacillota
TGG
Pro
>WENV183151944
OLOQ01001353
303718
Bacillota
TGT
Thr
>WENV183152120
OLOQ01002427
303718
Bacillota
TGT
Thr
>WENV183152486
OLOQ01005823
303718
Bacillota
TGT
Thr
>WENV183152540
OLOQ01007016
303718
Bacillota
TGT
Thr
>WENV183151898
OLOQ01001136
398833
Bacillota
TGT
Thr
>WENV183152972
OLOQ01024029
398833
Bacillota
TGT
Thr
>WENV183153187
OLOQ01052203
285556
Bacillota
TGT
Thr
>WENV183151442
OLOQ01000125
407840
Bacillota
TTC
Glu
>WENV183152090
OLOQ01002126
455259
Bacillota
TTC
Glu
>WENV183153180
OLOQ01050906
178143
Bacillota
TTC
Glu
>WENV183151685
OLOQ01000495
398857
Bacillota
TTC
Glu
>WENV183152002
OLOQ01001599
398832
Bacillota
TTC
Glu
>WENV183153105
OLOQ01039003
280642
Bacillota
TTG
Gln
>WENV183152197
OLOQ01002855
480324
Bacillota
TTG
Gln
>WENV183153106
OLOQ01039003
280639
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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