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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183183908
OLPL01004214
196621
Bacillota
GTC
Asp
>WENV183183841
OLPL01002836
144612
Bacillota
TCT
Arg
>WENV183183943
OLPL01005338
144612
Bacillota
TCT
Arg
>WENV183183838
OLPL01002819
235098
Bacillota
GAC
Val
>WENV183183814
OLPL01002477
44854
Bacillota
TGA
Ser
>WENV183184081
OLPL01013754
235154
Bacillota
GTT
Asn
>WENV183183946
OLPL01005344
59312
Bacillota
CAG
Leu
>WENV183184037
OLPL01009557
238910
Bacillota
CTT
Lys
>WENV183184079
OLPL01013629
338147
Bacillota
CTC
Glu
>WENV183183363
OLPL01000133
361897
Bacillota
CTC
Glu
>WENV183183933
OLPL01004978
429429
Bacillota
CCA
Trp
>WENV183183881
OLPL01003721
429429
Bacillota
CCA
Trp
>WENV183183772
OLPL01001922
429429
Bacillota
CCA
Trp
>WENV183183632
OLPL01001063
429429
Bacillota
CCA
Trp
>WENV183183873
OLPL01003445
44859
Bacillota
AAG
Leu
>WENV183184100
OLPL01017926
11034
Bacillota
GGA
Ser
>WENV183183404
OLPL01000226
338440
Bacillota
TTC
Glu
>WENV183183926
OLPL01004869
338149
Bacillota
CTC
Glu
>WENV183184053
OLPL01010704
245298
Bacillota
CGG
Pro
>WENV183183730
OLPL01001617
37269
Bacillota
TGA
Ser
>WENV183183469
OLPL01000412
287000
Bacillota
GTT
Asn
>WENV183183789
OLPL01002178
162445
Bacillota
CAT
Met
>WENV183183849
OLPL01002978
152492
Bacillota
GGG
Pro
>WENV183183776
OLPL01001974
152492
Bacillota
GGG
Pro
>WENV183183581
OLPL01000805
152492
Bacillota
GGG
Pro
>WENV183183497
OLPL01000455
152492
Bacillota
GGG
Pro
>WENV183184052
OLPL01010704
411547
Bacillota
CTG
Gln
>WENV183183722
OLPL01001550
147684
Bacillota
ACG
Arg
>WENV183183544
OLPL01000639
147684
Bacillota
ACG
Arg
>WENV183183815
OLPL01002477
4624
Bacillota
GCT
Ser
>WENV183183648
OLPL01001151
412387
Bacillota
GCA
Cys
>WENV183183449
OLPL01000374
412387
Bacillota
GCA
Cys
>WENV183183432
OLPL01000295
412387
Bacillota
GCA
Cys
>WENV183183953
OLPL01005497
411549
Bacillota
TTG
Gln
>WENV183183720
OLPL01001525
235142
Bacillota
CTT
Lys
>WENV183183645
OLPL01001147
235142
Bacillota
CTT
Lys
>WENV183183834
OLPL01002782
59296
Bacillota
AAG
Leu
>WENV183183914
OLPL01004344
148188
Bacillota
CCG
Arg
>WENV183183439
OLPL01000332
148188
Bacillota
CCG
Arg
>WENV183184097
OLPL01017572
80612
Bacillota
GTA
Tyr
>WENV183184173
OLPL01030120
236012
Bacillota
GTC
Asp
>WENV183184115
OLPL01019235
235124
Bacillota
TGG
Pro
>WENV183183682
OLPL01001322
254433
Bacillota
TAC
Val
>WENV183183293
OLPL01000033
254433
Bacillota
TAC
Val
>WENV183183831
OLPL01002749
157838
Bacillota
GTC
Asp
>WENV183183923
OLPL01004802
144583
Bacillota
ACG
Arg
>WENV183183907
OLPL01004214
235171
Bacillota
CCA
Trp
>WENV183183927
OLPL01004869
144621
Bacillota
GTT
Asn
>WENV183183757
OLPL01001794
235113
Bacillota
GAA
Phe
>WENV183183970
OLPL01006263
58712
Bacillota
CAG
Leu
>WENV183184202
OLPL01040860
144594
Bacillota
CAC
Val
>WENV183183671
OLPL01001273
95563
Bacillota
GTA
Tyr
>WENV183183783
OLPL01002077
272488
Bacillota
GAA
Phe
>WENV183183468
OLPL01000411
272488
Bacillota
GAA
Phe
>WENV183183642
OLPL01001120
119513
Bacillota
CAA
Leu
>WENV183184172
OLPL01030120
146770
Bacillota
TTC
Glu
>WENV183184049
OLPL01010113
238945
Bacillota
GCC
Gly
>WENV183183896
OLPL01004062
238945
Bacillota
GCC
Gly
>WENV183183875
OLPL01003497
238945
Bacillota
GCC
Gly
>WENV183183760
OLPL01001830
238945
Bacillota
GCC
Gly
>WENV183183630
OLPL01001063
238945
Bacillota
GCC
Gly
>WENV183183445
OLPL01000350
238945
Bacillota
GCC
Gly
>WENV183183733
OLPL01001640
338128
Bacillota
TTC
Glu
>WENV183183437
OLPL01000314
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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