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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183227946
OLQQ01005958
377363
Bacillota
GAA
Phe
>WENV183227959
OLQQ01006850
99852
Bacillota
GTA
Tyr
>WENV183227997
OLQQ01010553
349107
Bacillota
GCC
Gly
>WENV183228058
OLQQ01019468
480520
Bacillota
TCC
Gly
>WENV183228044
OLQQ01016053
444314
Bacillota
GTT
Asn
>WENV183228099
OLQQ01030319
401881
Bacillota
CCT
Arg
>WENV183227600
OLQQ01000206
280492
Bacillota
CTT
Lys
>WENV183227968
OLQQ01007573
280642
Bacillota
TTG
Gln
>WENV183227969
OLQQ01007573
280639
Bacillota
TTT
Lys
>WENV183227680
OLQQ01000440
46658
Bacillota
AAG
Leu
>WENV183227492
OLQQ01000029
184497
Bacillota
GGG
Pro
>WENV183227611
OLQQ01000235
184497
Bacillota
GGG
Pro
>WENV183227779
OLQQ01001463
184497
Bacillota
GGG
Pro
>WENV183227862
OLQQ01002780
184497
Bacillota
GGG
Pro
>WENV183227894
OLQQ01003807
184497
Bacillota
GGG
Pro
>WENV183227972
OLQQ01007573
176018
Bacillota
CAT
Met
>WENV183227899
OLQQ01004192
376224
Bacillota
TGG
Pro
>WENV183227593
OLQQ01000178
179176
Bacillota
ACG
Arg
>WENV183227700
OLQQ01000554
179176
Bacillota
ACG
Arg
>WENV183227950
OLQQ01006538
352588
Bacillota
CAT
Met
>WENV183227935
OLQQ01005335
47119
Bacillota
TAA
Leu
>WENV183227917
OLQQ01004917
190476
Bacillota
CAT
Met
>WENV183228083
OLQQ01027384
176014
Bacillota
TCT
Arg
>WENV183227976
OLQQ01007573
480360
Bacillota
GCA
Cys
>WENV183228013
OLQQ01012980
73009
Bacillota
CAG
Leu
>WENV183227555
OLQQ01000103
481217
Bacillota
GCA
Cys
>WENV183227556
OLQQ01000103
481217
Bacillota
GCA
Cys
>WENV183228070
OLQQ01021972
281417
Bacillota
GTC
Asp
>WENV183228015
OLQQ01013155
330433
Bacillota
GTG
His
>WENV183227754
OLQQ01001153
21311
Bacillota
GCT
Ser
>WENV183228079
OLQQ01025764
175831
Bacillota
ACG
Arg
>WENV183228077
OLQQ01024193
42948
Bacillota
GGA
Ser
>WENV183227936
OLQQ01005335
179130
Bacillota
ACG
Arg
>WENV183227974
OLQQ01007573
176015
Bacillota
TGG
Pro
>WENV183228104
OLQQ01032559
399041
Bacillota
CCA
Trp
>WENV183227961
OLQQ01007020
178152
Bacillota
GTT
Asn
>WENV183227978
OLQQ01007573
280640
Bacillota
TAC
Val
>WENV183228089
OLQQ01028175
282867
Bacillota
TGT
Thr
>WENV183227932
OLQQ01005335
119278
Bacillota
TAG
Leu
>WENV183227995
OLQQ01010265
120584
Bacillota
GTA
Tyr
>WENV183228064
OLQQ01021831
398854
Bacillota
CTC
Glu
>WENV183228004
OLQQ01011060
508151
Bacillota
GGT
Thr
>WENV183227685
OLQQ01000462
497729
Bacillota
CCA
Trp
>WENV183227717
OLQQ01000749
497729
Bacillota
CCA
Trp
>WENV183227618
OLQQ01000258
180688
Bacillota
GTC
Asp
>WENV183228087
OLQQ01028175
178143
Bacillota
TTC
Glu
>WENV183227796
OLQQ01001730
56079
Bacillota
AAG
Leu
>WENV183227975
OLQQ01007573
176019
Bacillota
GTG
His
>WENV183228005
OLQQ01011217
204381
Bacillota
GAT
Ile
>WENV183227895
OLQQ01003832
117745
Bacillota
GTA
Tyr
>WENV183228017
OLQQ01013155
354380
Bacillota
TTT
Lys
>WENV183228031
OLQQ01014427
179755
Bacillota
CCG
Arg
>WENV183227573
OLQQ01000129
330413
Bacillota
CTT
Lys
>WENV183227918
OLQQ01004917
398832
Bacillota
TTC
Glu
>WENV183227912
OLQQ01004553
449573
Bacillota
>WENV183227747
OLQQ01001065
24146
Bacillota
GCT
Ser
>WENV183227588
OLQQ01000166
52748
Bacillota
TGA
Ser
>WENV183227768
OLQQ01001380
282755
Bacillota
GGT
Thr
>WENV183227537
OLQQ01000063
280476
Bacillota
TTT
Lys
>WENV183227703
OLQQ01000579
280476
Bacillota
TTT
Lys
>WENV183227614
OLQQ01000258
332651
Bacillota
GTT
Asn
>WENV183227572
OLQQ01000126
398852
Bacillota
CTC
Glu
>WENV183227637
OLQQ01000312
398852
Bacillota
CTC
Glu
>WENV183227742
OLQQ01000917
118359
Bacillota
GTA
Tyr
>WENV183227998
OLQQ01010553
175849
Bacillota
GTC
Asp
>WENV183227534
OLQQ01000063
179166
Bacillota
TCT
Arg
>WENV183228055
OLQQ01018306
56074
Bacillota
TGA
Ser
>WENV183228003
OLQQ01011035
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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