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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183354372
OLXC01000086
352996
Bacillota
TTC
Glu
>WENV183354387
OLXC01000130
281701
Bacillota
TGC
Ala
>WENV183354435
OLXC01000435
144612
Bacillota
TCT
Arg
>WENV183354457
OLXC01000546
169968
Bacillota
CAT
Met
>WENV183354458
OLXC01000546
272488
Bacillota
GAA
Phe
>WENV183354465
OLXC01000614
162445
Bacillota
CAT
Met
>WENV183354469
OLXC01000648
309417
Bacillota
GGC
Ala
>WENV183354490
OLXC01001006
235098
Bacillota
GAC
Val
>WENV183354502
OLXC01001184
163943
Bacillota
GTC
Asp
>WENV183354507
OLXC01001301
144583
Bacillota
ACG
Arg
>WENV183354509
OLXC01001311
274189
Bacillota
TGT
Thr
>WENV183354515
OLXC01001396
144594
Bacillota
CAC
Val
>WENV183354523
OLXC01001457
148188
Bacillota
CCG
Arg
>WENV183354530
OLXC01001574
338128
Bacillota
TTC
Glu
>WENV183354537
OLXC01001673
37269
Bacillota
TGA
Ser
>WENV183354539
OLXC01001678
245296
Bacillota
CCC
Gly
>WENV183354581
OLXC01002526
156937
Bacillota
GTG
His
>WENV183354582
OLXC01002526
340802
Bacillota
TTG
Gln
>WENV183354601
OLXC01002814
411549
Bacillota
TTG
Gln
>WENV183354608
OLXC01002964
80612
Bacillota
GTA
Tyr
>WENV183354631
OLXC01003509
338128
Bacillota
TTC
Glu
>WENV183354635
OLXC01003617
148188
Bacillota
CCG
Arg
>WENV183354660
OLXC01003941
245298
Bacillota
CGG
Pro
>WENV183354662
OLXC01003966
148188
Bacillota
CCG
Arg
>WENV183354721
OLXC01006811
344240
Bacillota
GCC
Gly
>WENV183354744
OLXC01007369
307003
Bacillota
TGC
Ala
>WENV183354746
OLXC01007462
235124
Bacillota
TGG
Pro
>WENV183354770
OLXC01008115
156189
Bacillota
GAT
Ile
>WENV183354809
OLXC01010685
238910
Bacillota
CTT
Lys
>WENV183354811
OLXC01010710
338149
Bacillota
CTC
Glu
>WENV183354834
OLXC01012379
58712
Bacillota
CAG
Leu
>WENV183354864
OLXC01015192
287000
Bacillota
GTT
Asn
>WENV183354867
OLXC01015519
235171
Bacillota
CCA
Trp
>WENV183354868
OLXC01015519
196621
Bacillota
GTC
Asp
>WENV183354869
OLXC01015519
235095
Bacillota
GGT
Thr
>WENV183354876
OLXC01016276
235150
Bacillota
TGC
Ala
>WENV183354909
OLXC01020137
157838
Bacillota
GTC
Asp
>WENV183354911
OLXC01020496
155958
Bacillota
GAT
Ile
>WENV183354936
OLXC01022534
202812
Bacillota
CAT
Met
>WENV183355010
OLXC01037399
144612
Bacillota
TCT
Arg
>WENV183355042
OLXC01042804
235079
Bacillota
GAA
Phe
>WENV183355044
OLXC01043250
158247
Bacillota
>WENV183355059
OLXC01046848
411547
Bacillota
CTG
Gln
>WENV183355081
OLXC01055517
147684
Bacillota
ACG
Arg
>WENV183355119
OLXC01065493
248965
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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