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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183366540
OLXP01000009
235078
Bacillota
TAC
Val
>WENV183366542
OLXP01000009
235079
Bacillota
GAA
Phe
>WENV183366580
OLXP01000030
338127
Bacillota
TTG
Gln
>WENV183366601
OLXP01000050
163943
Bacillota
GTC
Asp
>WENV183366678
OLXP01000144
298620
Bacillota
CAT
Met
>WENV183366729
OLXP01000232
163943
Bacillota
GTC
Asp
>WENV183366929
OLXP01001660
235134
Bacillota
GAA
Phe
>WENV183366930
OLXP01001660
240017
Bacillota
GCC
Gly
>WENV183367018
OLXP01003858
147684
Bacillota
ACG
Arg
>WENV183367080
OLXP01005876
44859
Bacillota
AAG
Leu
>WENV183367081
OLXP01005938
299139
Bacillota
TGC
Ala
>WENV183367082
OLXP01005938
173314
Bacillota
GAT
Ile
>WENV183367106
OLXP01007098
235124
Bacillota
TGG
Pro
>WENV183367119
OLXP01008013
152492
Bacillota
GGG
Pro
>WENV183367129
OLXP01008743
313454
Bacillota
GAA
Phe
>WENV183367131
OLXP01008756
158247
Bacillota
>WENV183367152
OLXP01010154
235117
Bacillota
TAC
Val
>WENV183367153
OLXP01010154
196621
Bacillota
GTC
Asp
>WENV183367154
OLXP01010154
235095
Bacillota
GGT
Thr
>WENV183367170
OLXP01010674
238910
Bacillota
CTT
Lys
>WENV183367194
OLXP01013082
411547
Bacillota
CTG
Gln
>WENV183367195
OLXP01013082
245298
Bacillota
CGG
Pro
>WENV183367206
OLXP01014096
144594
Bacillota
CAC
Val
>WENV183367214
OLXP01014657
247734
Bacillota
TGC
Ala
>WENV183367234
OLXP01016502
235127
Bacillota
TTT
Lys
>WENV183367235
OLXP01016574
80612
Bacillota
GTA
Tyr
>WENV183367304
OLXP01026307
238857
Bacillota
CCA
Trp
>WENV183367330
OLXP01032291
144577
Bacillota
GAT
Ile
>WENV183367334
OLXP01033149
4624
Bacillota
GCT
Ser
>WENV183367337
OLXP01033746
287000
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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