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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183367630
OLXQ01009489
58712
Bacillota
CAG
Leu
>WENV183367657
OLXQ01012173
148188
Bacillota
CCG
Arg
>WENV183367542
OLXQ01003053
245298
Bacillota
CGG
Pro
>WENV183367672
OLXQ01015387
338147
Bacillota
CTC
Glu
>WENV183367723
OLXQ01022280
338149
Bacillota
CTC
Glu
>WENV183367541
OLXQ01003053
411547
Bacillota
CTG
Gln
>WENV183367537
OLXQ01002961
344183
Bacillota
CTG
Gln
>WENV183367677
OLXQ01016403
293599
Bacillota
CTT
Lys
>WENV183367781
OLXQ01040258
313454
Bacillota
GAA
Phe
>WENV183367543
OLXQ01003064
235079
Bacillota
GAA
Phe
>WENV183367601
OLXQ01006672
272488
Bacillota
GAA
Phe
>WENV183367814
OLXQ01050647
235098
Bacillota
GAC
Val
>WENV183367682
OLXQ01017679
240017
Bacillota
GCC
Gly
>WENV183367721
OLXQ01021913
4624
Bacillota
GCT
Ser
>WENV183367494
OLXQ01001784
163943
Bacillota
GTC
Asp
>WENV183367780
OLXQ01040258
157838
Bacillota
GTC
Asp
>WENV183367750
OLXQ01030179
144612
Bacillota
TCT
Arg
>WENV183367720
OLXQ01021913
44854
Bacillota
TGA
Ser
>WENV183367848
OLXQ01064810
250201
Bacillota
TGC
Ala
>WENV183367710
OLXQ01021101
235150
Bacillota
TGC
Ala
>WENV183367845
OLXQ01062613
281701
Bacillota
TGC
Ala
>WENV183367733
OLXQ01025131
247734
Bacillota
TGC
Ala
>WENV183367457
OLXQ01000771
235124
Bacillota
TGG
Pro
>WENV183367664
OLXQ01014017
411549
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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