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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183392230
OLZE01001525
196621
Bacillota
GTC
Asp
>WENV183392179
OLZE01000943
309417
Bacillota
GGC
Ala
>WENV183392316
OLZE01002569
144612
Bacillota
TCT
Arg
>WENV183392284
OLZE01002039
235134
Bacillota
GAA
Phe
>WENV183392203
OLZE01001253
235098
Bacillota
GAC
Val
>WENV183391950
OLZE01000056
37071
Bacillota
TGA
Ser
>WENV183392335
OLZE01002946
304022
Bacillota
GCC
Gly
>WENV183391931
OLZE01000042
59312
Bacillota
CAG
Leu
>WENV183392502
OLZE01009623
238910
Bacillota
CTT
Lys
>WENV183392047
OLZE01000331
338147
Bacillota
CTC
Glu
>WENV183391958
OLZE01000072
338147
Bacillota
CTC
Glu
>WENV183392396
OLZE01004271
340802
Bacillota
TTG
Gln
>WENV183392206
OLZE01001296
429429
Bacillota
CCA
Trp
>WENV183392372
OLZE01003564
41154
Bacillota
TAA
Leu
>WENV183391930
OLZE01000042
44859
Bacillota
AAG
Leu
>WENV183391929
OLZE01000042
44859
Bacillota
AAG
Leu
>WENV183392455
OLZE01006732
11034
Bacillota
GGA
Ser
>WENV183392395
OLZE01004271
156937
Bacillota
GTG
His
>WENV183392231
OLZE01001525
235079
Bacillota
GAA
Phe
>WENV183392384
OLZE01003919
338149
Bacillota
CTC
Glu
>WENV183392315
OLZE01002500
245298
Bacillota
CGG
Pro
>WENV183392131
OLZE01000654
155089
Bacillota
CAT
Met
>WENV183392622
OLZE01028152
201704
Bacillota
GAT
Ile
>WENV183392285
OLZE01002039
240017
Bacillota
GCC
Gly
>WENV183392314
OLZE01002500
411547
Bacillota
CTG
Gln
>WENV183392302
OLZE01002266
411547
Bacillota
CTG
Gln
>WENV183392544
OLZE01013734
147684
Bacillota
ACG
Arg
>WENV183392282
OLZE01002039
263765
Bacillota
TAC
Val
>WENV183392414
OLZE01005167
412387
Bacillota
GCA
Cys
>WENV183392437
OLZE01006156
235095
Bacillota
GGT
Thr
>WENV183392351
OLZE01003148
419639
Bacillota
GCA
Cys
>WENV183392163
OLZE01000787
411549
Bacillota
TTG
Gln
>WENV183392125
OLZE01000613
235142
Bacillota
CTT
Lys
>WENV183392697
OLZE01058649
59296
Bacillota
AAG
Leu
>WENV183392185
OLZE01001022
148188
Bacillota
CCG
Arg
>WENV183392508
OLZE01009806
80612
Bacillota
GTA
Tyr
>WENV183392271
OLZE01001926
256380
Bacillota
>WENV183392058
OLZE01000356
235127
Bacillota
TTT
Lys
>WENV183392636
OLZE01033706
298620
Bacillota
CAT
Met
>WENV183392307
OLZE01002338
235124
Bacillota
TGG
Pro
>WENV183392365
OLZE01003486
338129
Bacillota
TGT
Thr
>WENV183392232
OLZE01001537
144583
Bacillota
ACG
Arg
>WENV183392275
OLZE01001942
144652
Bacillota
GTC
Asp
>WENV183392694
OLZE01057428
247734
Bacillota
TGC
Ala
>WENV183392229
OLZE01001525
235171
Bacillota
CCA
Trp
>WENV183392107
OLZE01000524
238974
Bacillota
GAA
Phe
>WENV183392439
OLZE01006214
144621
Bacillota
GTT
Asn
>WENV183391948
OLZE01000056
235113
Bacillota
GAA
Phe
>WENV183392360
OLZE01003372
243098
Bacillota
GGT
Thr
>WENV183392318
OLZE01002569
58712
Bacillota
CAG
Leu
>WENV183392246
OLZE01001666
245296
Bacillota
CCC
Gly
>WENV183392385
OLZE01003919
272992
Bacillota
CTT
Lys
>WENV183392350
OLZE01003148
344240
Bacillota
GCC
Gly
>WENV183392349
OLZE01003148
196632
Bacillota
GTC
Asp
>WENV183392268
OLZE01001870
144594
Bacillota
CAC
Val
>WENV183392048
OLZE01000343
95563
Bacillota
GTA
Tyr
>WENV183392074
OLZE01000398
414486
Bacillota
CCC
Gly
>WENV183392057
OLZE01000356
272488
Bacillota
GAA
Phe
>WENV183392279
OLZE01001953
114075
Bacillota
TAG
Leu
>WENV183392625
OLZE01029730
338128
Bacillota
TTC
Glu
>WENV183392600
OLZE01023950
338128
Bacillota
TTC
Glu
>WENV183392566
OLZE01017576
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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