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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183408598
OMAD01018256
24650
Bacillota
TAA
Leu
>WENV183408430
OMAD01005232
155958
Bacillota
GAT
Ile
>WENV183408296
OMAD01001593
37213
Bacillota
TGA
Ser
>WENV183408339
OMAD01002355
144612
Bacillota
TCT
Arg
>WENV183408592
OMAD01017846
338152
Bacillota
TTC
Glu
>WENV183408326
OMAD01002101
44854
Bacillota
TGA
Ser
>WENV183408396
OMAD01004140
304022
Bacillota
GCC
Gly
>WENV183408509
OMAD01009854
238910
Bacillota
CTT
Lys
>WENV183408574
OMAD01016284
235150
Bacillota
TGC
Ala
>WENV183408392
OMAD01004134
340802
Bacillota
TTG
Gln
>WENV183408203
OMAD01000526
340802
Bacillota
TTG
Gln
>WENV183408415
OMAD01004718
429429
Bacillota
CCA
Trp
>WENV183408555
OMAD01013538
313454
Bacillota
GAA
Phe
>WENV183408446
OMAD01005729
11034
Bacillota
GGA
Ser
>WENV183408202
OMAD01000526
156937
Bacillota
GTG
His
>WENV183408395
OMAD01004140
235079
Bacillota
GAA
Phe
>WENV183408597
OMAD01017989
173314
Bacillota
GAT
Ile
>WENV183408285
OMAD01001313
338149
Bacillota
CTC
Glu
>WENV183408188
OMAD01000431
245298
Bacillota
CGG
Pro
>WENV183408368
OMAD01003140
37269
Bacillota
TGA
Ser
>WENV183408233
OMAD01000738
169968
Bacillota
CAT
Met
>WENV183408187
OMAD01000431
411547
Bacillota
CTG
Gln
>WENV183408327
OMAD01002101
4624
Bacillota
GCT
Ser
>WENV183408363
OMAD01003036
235095
Bacillota
GGT
Thr
>WENV183408268
OMAD01001125
411549
Bacillota
TTG
Gln
>WENV183408287
OMAD01001323
148188
Bacillota
CCG
Arg
>WENV183408502
OMAD01009290
235124
Bacillota
TGG
Pro
>WENV183408383
OMAD01003801
338129
Bacillota
TGT
Thr
>WENV183408577
OMAD01016379
157838
Bacillota
GTC
Asp
>WENV183408387
OMAD01003879
144583
Bacillota
ACG
Arg
>WENV183408286
OMAD01001313
144621
Bacillota
GTT
Asn
>WENV183408425
OMAD01004961
58712
Bacillota
CAG
Leu
>WENV183408206
OMAD01000543
245296
Bacillota
CCC
Gly
>WENV183408375
OMAD01003440
272992
Bacillota
CTT
Lys
>WENV183408262
OMAD01001046
144594
Bacillota
CAC
Val
>WENV183408223
OMAD01000628
272488
Bacillota
GAA
Phe
>WENV183408241
OMAD01000790
114075
Bacillota
TAG
Leu
>WENV183408576
OMAD01016379
263523
Bacillota
TAC
Val
>WENV183408437
OMAD01005493
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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