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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183416817
OMAS01010821
99852
Bacillota
GTA
Tyr
>WENV183416191
OMAS01000037
343590
Bacillota
GCC
Gly
>WENV183416192
OMAS01000037
343590
Bacillota
GCC
Gly
>WENV183416879
OMAS01015873
405363
Bacillota
GCA
Cys
>WENV183416906
OMAS01018651
280428
Bacillota
GAA
Phe
>WENV183416822
OMAS01011009
48505
Bacillota
TGA
Ser
>WENV183417137
OMAS01072369
175842
Bacillota
CAC
Val
>WENV183417036
OMAS01043515
291553
Bacillota
GAA
Phe
>WENV183416919
OMAS01021167
190476
Bacillota
CAT
Met
>WENV183416819
OMAS01010905
176014
Bacillota
TCT
Arg
>WENV183416480
OMAS01001127
82124
Bacillota
TAA
Leu
>WENV183416182
OMAS01000014
73664
Bacillota
CAG
Leu
>WENV183416698
OMAS01005107
280447
Bacillota
GAC
Val
>WENV183416309
OMAS01000289
284723
Bacillota
TAC
Val
>WENV183416484
OMAS01001154
73009
Bacillota
CAG
Leu
>WENV183416570
OMAS01002238
73009
Bacillota
CAG
Leu
>WENV183416847
OMAS01012976
291581
Bacillota
CGG
Pro
>WENV183416796
OMAS01009156
175859
Bacillota
TCT
Arg
>WENV183416997
OMAS01034485
175831
Bacillota
ACG
Arg
>WENV183417087
OMAS01060785
179810
Bacillota
TCT
Arg
>WENV183416833
OMAS01011644
284627
Bacillota
GAA
Phe
>WENV183416317
OMAS01000295
291634
Bacillota
GAA
Phe
>WENV183416935
OMAS01025152
195824
Bacillota
GAT
Ile
>WENV183417124
OMAS01069575
137739
Bacillota
TAG
Leu
>WENV183416846
OMAS01012976
480322
Bacillota
CTG
Gln
>WENV183416196
OMAS01000042
187364
Bacillota
CAT
Met
>WENV183416578
OMAS01002530
175868
Bacillota
GTT
Asn
>WENV183416577
OMAS01002530
398854
Bacillota
CTC
Glu
>WENV183416703
OMAS01005334
291576
Bacillota
CCC
Gly
>WENV183416945
OMAS01026215
480324
Bacillota
TTG
Gln
>WENV183416189
OMAS01000037
497729
Bacillota
CCA
Trp
>WENV183416827
OMAS01011224
323864
Bacillota
TGC
Ala
>WENV183416903
OMAS01018405
432453
Bacillota
TTC
Glu
>WENV183416544
OMAS01001919
280444
Bacillota
GGT
Thr
>WENV183416293
OMAS01000244
483485
Bacillota
CCC
Gly
>WENV183416834
OMAS01011651
354380
Bacillota
TTT
Lys
>WENV183416597
OMAS01002842
179755
Bacillota
CCG
Arg
>WENV183417035
OMAS01043515
280547
Bacillota
GTC
Asp
>WENV183416900
OMAS01018405
445407
Bacillota
GCC
Gly
>WENV183416902
OMAS01018405
289761
Bacillota
TTT
Lys
>WENV183416920
OMAS01021167
398832
Bacillota
TTC
Glu
>WENV183416989
OMAS01033608
25955
Bacillota
GCT
Ser
>WENV183416755
OMAS01007414
118669
Bacillota
GTA
Tyr
>WENV183416295
OMAS01000257
52748
Bacillota
TGA
Ser
>WENV183416904
OMAS01018405
289715
Bacillota
TAC
Val
>WENV183416644
OMAS01003911
398852
Bacillota
CTC
Glu
>WENV183416645
OMAS01003911
398852
Bacillota
CTC
Glu
>WENV183416671
OMAS01004487
398852
Bacillota
CTC
Glu
>WENV183417116
OMAS01068268
201856
Bacillota
GAT
Ile
>WENV183416621
OMAS01003321
289123
Bacillota
GGT
Thr
>WENV183416958
OMAS01028637
280483
Bacillota
GAA
Phe
>WENV183417018
OMAS01038488
285601
Bacillota
TTC
Glu
>WENV183417088
OMAS01060785
175857
Bacillota
GTG
His
>WENV183416959
OMAS01028637
285756
Bacillota
GCC
Gly
>WENV183416543
OMAS01001919
175849
Bacillota
GTC
Asp
>WENV183416608
OMAS01003184
405393
Bacillota
GCC
Gly
>WENV183416765
OMAS01007643
56074
Bacillota
TGA
Ser
>WENV183416522
OMAS01001776
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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