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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183419881
OMBA01000015
56079
Bacillota
AAG
Leu
>WENV183419882
OMBA01000015
56079
Bacillota
AAG
Leu
>WENV183420258
OMBA01000880
175831
Bacillota
ACG
Arg
>WENV183420573
OMBA01008967
175842
Bacillota
CAC
Val
>WENV183419883
OMBA01000015
73664
Bacillota
CAG
Leu
>WENV183420260
OMBA01000907
73009
Bacillota
CAG
Leu
>WENV183420366
OMBA01002365
190476
Bacillota
CAT
Met
>WENV183420815
OMBA01041145
187589
Bacillota
CAT
Met
>WENV183420765
OMBA01026253
291576
Bacillota
CCC
Gly
>WENV183420407
OMBA01003410
179755
Bacillota
CCG
Arg
>WENV183420456
OMBA01004453
291581
Bacillota
CGG
Pro
>WENV183420421
OMBA01003626
398854
Bacillota
CTC
Glu
>WENV183419937
OMBA01000053
398852
Bacillota
CTC
Glu
>WENV183420008
OMBA01000123
398852
Bacillota
CTC
Glu
>WENV183420463
OMBA01004895
480322
Bacillota
CTG
Gln
>WENV183419890
OMBA01000017
280492
Bacillota
CTT
Lys
>WENV183420039
OMBA01000175
280492
Bacillota
CTT
Lys
>WENV183420386
OMBA01002783
280447
Bacillota
GAC
Val
>WENV183420454
OMBA01004437
280447
Bacillota
GAC
Val
>WENV183420492
OMBA01005884
280447
Bacillota
GAC
Val
>WENV183420744
OMBA01023631
179563
Bacillota
GAT
Ile
>WENV183420599
OMBA01010720
175825
Bacillota
GAT
Ile
>WENV183420286
OMBA01001169
189473
Bacillota
GAT
Ile
>WENV183420719
OMBA01019622
201856
Bacillota
GAT
Ile
>WENV183420611
OMBA01011581
405363
Bacillota
GCA
Cys
>WENV183420018
OMBA01000153
424998
Bacillota
GCC
Gly
>WENV183420585
OMBA01009784
407858
Bacillota
GCC
Gly
>WENV183420610
OMBA01011581
321753
Bacillota
GCC
Gly
>WENV183420341
OMBA01001786
5692
Bacillota
GCT
Ser
>WENV183420680
OMBA01015145
184497
Bacillota
GGG
Pro
>WENV183420466
OMBA01005095
280444
Bacillota
GGT
Thr
>WENV183420382
OMBA01002734
99852
Bacillota
GTA
Tyr
>WENV183420007
OMBA01000123
117745
Bacillota
GTA
Tyr
>WENV183419996
OMBA01000117
175899
Bacillota
GTC
Asp
>WENV183420588
OMBA01009863
175915
Bacillota
GTC
Asp
>WENV183420003
OMBA01000117
175857
Bacillota
GTG
His
>WENV183420422
OMBA01003626
175868
Bacillota
GTT
Asn
>WENV183420788
OMBA01030489
400963
Bacillota
GTT
Asn
>WENV183420589
OMBA01009863
284723
Bacillota
TAC
Val
>WENV183420061
OMBA01000233
292612
Bacillota
TAC
Val
>WENV183420288
OMBA01001175
321248
Bacillota
TAC
Val
>WENV183420447
OMBA01004272
175859
Bacillota
TCT
Arg
>WENV183419963
OMBA01000084
46643
Bacillota
TGA
Ser
>WENV183420340
OMBA01001786
56074
Bacillota
TGA
Ser
>WENV183420792
OMBA01030633
280500
Bacillota
TGC
Ala
>WENV183420406
OMBA01003400
295166
Bacillota
TGC
Ala
>WENV183420598
OMBA01010720
280436
Bacillota
TGC
Ala
>WENV183420302
OMBA01001396
280473
Bacillota
TGG
Pro
>WENV183420415
OMBA01003503
398833
Bacillota
TGT
Thr
>WENV183420367
OMBA01002365
398832
Bacillota
TTC
Glu
>WENV183420578
OMBA01009332
480324
Bacillota
TTG
Gln
>WENV183420784
OMBA01029539
480324
Bacillota
TTG
Gln
>WENV183420619
OMBA01011949
309916
Bacillota
TTT
Lys
>WENV183420005
OMBA01000117
280463
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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