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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183421350
OMBB01008199
510477
Bacillota
TCC
Gly
>WENV183421134
OMBB01001071
99852
Bacillota
GTA
Tyr
>WENV183421097
OMBB01000781
343590
Bacillota
GCC
Gly
>WENV183421223
OMBB01002398
343590
Bacillota
GCC
Gly
>WENV183421309
OMBB01006166
234991
Bacillota
GAT
Ile
>WENV183421407
OMBB01014848
349107
Bacillota
GCC
Gly
>WENV183421142
OMBB01001184
405363
Bacillota
GCA
Cys
>WENV183421406
OMBB01014848
280428
Bacillota
GAA
Phe
>WENV183421492
OMBB01028595
280428
Bacillota
GAA
Phe
>WENV183421170
OMBB01001772
175842
Bacillota
CAC
Val
>WENV183421326
OMBB01006741
291629
Bacillota
CCA
Trp
>WENV183421408
OMBB01015404
179176
Bacillota
ACG
Arg
>WENV183421332
OMBB01007276
215243
Bacillota
CAT
Met
>WENV183421137
OMBB01001135
82124
Bacillota
TAA
Leu
>WENV183420875
OMBB01000016
73664
Bacillota
CAG
Leu
>WENV183421083
OMBB01000662
280447
Bacillota
GAC
Val
>WENV183421128
OMBB01001023
280447
Bacillota
GAC
Val
>WENV183421026
OMBB01000399
5692
Bacillota
GCT
Ser
>WENV183421187
OMBB01002009
5692
Bacillota
GCT
Ser
>WENV183421302
OMBB01005857
312274
Bacillota
GGC
Ala
>WENV183420937
OMBB01000082
186123
Bacillota
GTC
Asp
>WENV183421108
OMBB01000841
73009
Bacillota
CAG
Leu
>WENV183421114
OMBB01000889
291581
Bacillota
CGG
Pro
>WENV183421366
OMBB01010250
291581
Bacillota
CGG
Pro
>WENV183421106
OMBB01000841
175859
Bacillota
TCT
Arg
>WENV183421024
OMBB01000396
175831
Bacillota
ACG
Arg
>WENV183421471
OMBB01025909
332181
Bacillota
TGT
Thr
>WENV183421220
OMBB01002371
179810
Bacillota
TCT
Arg
>WENV183421022
OMBB01000393
284627
Bacillota
GAA
Phe
>WENV183421394
OMBB01013666
346451
Bacillota
TTT
Lys
>WENV183421113
OMBB01000889
480322
Bacillota
CTG
Gln
>WENV183421124
OMBB01000933
480322
Bacillota
CTG
Gln
>WENV183421146
OMBB01001222
480322
Bacillota
CTG
Gln
>WENV183421347
OMBB01008101
480322
Bacillota
CTG
Gln
>WENV183421090
OMBB01000707
187364
Bacillota
CAT
Met
>WENV183421125
OMBB01000940
175868
Bacillota
GTT
Asn
>WENV183421236
OMBB01002768
175868
Bacillota
GTT
Asn
>WENV183421235
OMBB01002768
398854
Bacillota
CTC
Glu
>WENV183421076
OMBB01000615
291576
Bacillota
CCC
Gly
>WENV183421409
OMBB01015804
480324
Bacillota
TTG
Gln
>WENV183421182
OMBB01001940
497729
Bacillota
CCA
Trp
>WENV183421437
OMBB01020077
180688
Bacillota
GTC
Asp
>WENV183421522
OMBB01036268
303718
Bacillota
TGT
Thr
>WENV183421305
OMBB01005995
323864
Bacillota
TGC
Ala
>WENV183421369
OMBB01010298
292374
Bacillota
TGC
Ala
>WENV183421434
OMBB01020077
398857
Bacillota
TTC
Glu
>WENV183421193
OMBB01002190
204381
Bacillota
GAT
Ile
>WENV183421064
OMBB01000543
280444
Bacillota
GGT
Thr
>WENV183421248
OMBB01003271
280444
Bacillota
GGT
Thr
>WENV183421131
OMBB01001067
483485
Bacillota
CCC
Gly
>WENV183421147
OMBB01001255
179755
Bacillota
CCG
Arg
>WENV183421310
OMBB01006166
291650
Bacillota
TGC
Ala
>WENV183421299
OMBB01005389
46835
Bacillota
TAA
Leu
>WENV183420995
OMBB01000272
52748
Bacillota
TGA
Ser
>WENV183421368
OMBB01010298
201856
Bacillota
GAT
Ile
>WENV183421380
OMBB01011864
285601
Bacillota
TTC
Glu
>WENV183421221
OMBB01002371
175857
Bacillota
GTG
His
>WENV183421063
OMBB01000543
175849
Bacillota
GTC
Asp
>WENV183421247
OMBB01003271
175849
Bacillota
GTC
Asp
>WENV183421325
OMBB01006741
405393
Bacillota
GCC
Gly
>WENV183421025
OMBB01000399
56074
Bacillota
TGA
Ser
>WENV183421186
OMBB01002009
56074
Bacillota
TGA
Ser
>WENV183421075
OMBB01000593
280473
Bacillota
TGG
Pro
>WENV183421197
OMBB01002237
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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