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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183427047
OMBM01002854
99852
Bacillota
GTA
Tyr
>WENV183427138
OMBM01006687
405363
Bacillota
GCA
Cys
>WENV183426889
OMBM01000532
291579
Bacillota
GAA
Phe
>WENV183427326
OMBM01032806
229015
Bacillota
GTG
His
>WENV183426779
OMBM01000197
280492
Bacillota
CTT
Lys
>WENV183426780
OMBM01000199
280492
Bacillota
CTT
Lys
>WENV183426962
OMBM01000988
175842
Bacillota
CAC
Val
>WENV183426971
OMBM01001082
184497
Bacillota
GGG
Pro
>WENV183426795
OMBM01000230
179176
Bacillota
ACG
Arg
>WENV183426669
OMBM01000043
73664
Bacillota
CAG
Leu
>WENV183427004
OMBM01001528
280447
Bacillota
GAC
Val
>WENV183426957
OMBM01000935
5692
Bacillota
GCT
Ser
>WENV183426851
OMBM01000391
284723
Bacillota
TAC
Val
>WENV183426959
OMBM01000957
284723
Bacillota
TAC
Val
>WENV183426875
OMBM01000494
73009
Bacillota
CAG
Leu
>WENV183426891
OMBM01000547
73009
Bacillota
CAG
Leu
>WENV183427242
OMBM01017435
481217
Bacillota
GCA
Cys
>WENV183427012
OMBM01001891
291581
Bacillota
CGG
Pro
>WENV183427167
OMBM01008583
291581
Bacillota
CGG
Pro
>WENV183426845
OMBM01000383
175859
Bacillota
TCT
Arg
>WENV183426954
OMBM01000923
480322
Bacillota
CTG
Gln
>WENV183427011
OMBM01001891
480322
Bacillota
CTG
Gln
>WENV183427166
OMBM01008583
480322
Bacillota
CTG
Gln
>WENV183426663
OMBM01000034
480322
Bacillota
CTG
Gln
>WENV183427327
OMBM01032806
401685
Bacillota
TTG
Gln
>WENV183427159
OMBM01008268
175868
Bacillota
GTT
Asn
>WENV183427244
OMBM01017830
314834
Bacillota
TGC
Ala
>WENV183426936
OMBM01000807
291576
Bacillota
CCC
Gly
>WENV183426890
OMBM01000544
480324
Bacillota
TTG
Gln
>WENV183426958
OMBM01000938
480324
Bacillota
TTG
Gln
>WENV183427301
OMBM01027197
303718
Bacillota
TGT
Thr
>WENV183426667
OMBM01000043
56079
Bacillota
AAG
Leu
>WENV183426668
OMBM01000043
56079
Bacillota
AAG
Leu
>WENV183426734
OMBM01000104
117745
Bacillota
GTA
Tyr
>WENV183426907
OMBM01000631
280444
Bacillota
GGT
Thr
>WENV183426946
OMBM01000880
280444
Bacillota
GGT
Thr
>WENV183427265
OMBM01022757
104114
Bacillota
CAG
Leu
>WENV183426820
OMBM01000300
46643
Bacillota
TGA
Ser
>WENV183427025
OMBM01002094
179755
Bacillota
CCG
Arg
>WENV183427027
OMBM01002296
179755
Bacillota
CCG
Arg
>WENV183426689
OMBM01000069
127792
Bacillota
TAG
Leu
>WENV183427272
OMBM01023427
398832
Bacillota
TTC
Glu
>WENV183426676
OMBM01000060
280462
Bacillota
GAA
Phe
>WENV183426940
OMBM01000844
398852
Bacillota
CTC
Glu
>WENV183426621
OMBM01000001
280483
Bacillota
GAA
Phe
>WENV183427218
OMBM01013987
298260
Bacillota
GTT
Asn
>WENV183426622
OMBM01000001
285756
Bacillota
GCC
Gly
>WENV183426994
OMBM01001346
398833
Bacillota
TGT
Thr
>WENV183426945
OMBM01000880
175849
Bacillota
GTC
Asp
>WENV183427355
OMBM01044837
317820
Bacillota
TAC
Val
>WENV183426677
OMBM01000060
280463
Bacillota
TTT
Lys
>WENV183427278
OMBM01023815
179166
Bacillota
TCT
Arg
>WENV183426953
OMBM01000919
280473
Bacillota
TGG
Pro
>WENV183427022
OMBM01002020
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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