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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
73 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183436773
OMCD01000034
175857
Bacillota
GTG
His
>WENV183436824
OMCD01000126
483485
Bacillota
CCC
Gly
>WENV183436826
OMCD01000130
187364
Bacillota
CAT
Met
>WENV183436847
OMCD01000168
73009
Bacillota
CAG
Leu
>WENV183436848
OMCD01000168
99852
Bacillota
GTA
Tyr
>WENV183436857
OMCD01000192
190476
Bacillota
CAT
Met
>WENV183436858
OMCD01000192
398832
Bacillota
TTC
Glu
>WENV183436859
OMCD01000192
179755
Bacillota
CCG
Arg
>WENV183436863
OMCD01000203
175831
Bacillota
ACG
Arg
>WENV183436899
OMCD01000290
398852
Bacillota
CTC
Glu
>WENV183436905
OMCD01000301
284627
Bacillota
GAA
Phe
>WENV183436909
OMCD01000311
280462
Bacillota
GAA
Phe
>WENV183436921
OMCD01000351
280492
Bacillota
CTT
Lys
>WENV183436923
OMCD01000353
480322
Bacillota
CTG
Gln
>WENV183436931
OMCD01000414
398852
Bacillota
CTC
Glu
>WENV183436932
OMCD01000414
398852
Bacillota
CTC
Glu
>WENV183436970
OMCD01000632
117745
Bacillota
GTA
Tyr
>WENV183436978
OMCD01000664
280473
Bacillota
TGG
Pro
>WENV183436987
OMCD01000712
285601
Bacillota
TTC
Glu
>WENV183437001
OMCD01000774
480322
Bacillota
CTG
Gln
>WENV183437002
OMCD01000774
291581
Bacillota
CGG
Pro
>WENV183437013
OMCD01000843
179755
Bacillota
CCG
Arg
>WENV183437030
OMCD01000932
280444
Bacillota
GGT
Thr
>WENV183437032
OMCD01000932
175849
Bacillota
GTC
Asp
>WENV183437033
OMCD01000932
280444
Bacillota
GGT
Thr
>WENV183437034
OMCD01000937
291576
Bacillota
CCC
Gly
>WENV183437044
OMCD01001008
56079
Bacillota
AAG
Leu
>WENV183437045
OMCD01001008
73664
Bacillota
CAG
Leu
>WENV183437067
OMCD01001181
175868
Bacillota
GTT
Asn
>WENV183437068
OMCD01001184
179755
Bacillota
CCG
Arg
>WENV183437074
OMCD01001231
204381
Bacillota
GAT
Ile
>WENV183437081
OMCD01001249
175859
Bacillota
TCT
Arg
>WENV183437105
OMCD01001380
291576
Bacillota
CCC
Gly
>WENV183437122
OMCD01001543
204381
Bacillota
GAT
Ile
>WENV183437130
OMCD01001589
480324
Bacillota
TTG
Gln
>WENV183437142
OMCD01001698
73664
Bacillota
CAG
Leu
>WENV183437160
OMCD01001817
175831
Bacillota
ACG
Arg
>WENV183437178
OMCD01001961
280447
Bacillota
GAC
Val
>WENV183437181
OMCD01001991
398835
Bacillota
GCC
Gly
>WENV183437186
OMCD01002070
73009
Bacillota
CAG
Leu
>WENV183437189
OMCD01002121
406186
Bacillota
CTC
Glu
>WENV183437196
OMCD01002236
190476
Bacillota
CAT
Met
>WENV183437197
OMCD01002236
398832
Bacillota
TTC
Glu
>WENV183437204
OMCD01002367
280447
Bacillota
GAC
Val
>WENV183437205
OMCD01002406
398857
Bacillota
TTC
Glu
>WENV183437217
OMCD01002488
322848
Bacillota
CTT
Lys
>WENV183437240
OMCD01002681
321248
Bacillota
TAC
Val
>WENV183437269
OMCD01003103
73638
Bacillota
AAG
Leu
>WENV183437298
OMCD01003448
497729
Bacillota
CCA
Trp
>WENV183437319
OMCD01003978
405363
Bacillota
GCA
Cys
>WENV183437322
OMCD01004022
56074
Bacillota
TGA
Ser
>WENV183437323
OMCD01004022
5692
Bacillota
GCT
Ser
>WENV183437331
OMCD01004229
407726
Bacillota
CTG
Gln
>WENV183437333
OMCD01004324
73009
Bacillota
CAG
Leu
>WENV183437345
OMCD01004523
280473
Bacillota
TGG
Pro
>WENV183437351
OMCD01004727
398854
Bacillota
CTC
Glu
>WENV183437352
OMCD01004727
175868
Bacillota
GTT
Asn
>WENV183437367
OMCD01005314
398854
Bacillota
CTC
Glu
>WENV183437368
OMCD01005314
175868
Bacillota
GTT
Asn
>WENV183437373
OMCD01005483
21311
Bacillota
GCT
Ser
>WENV183437384
OMCD01005763
280473
Bacillota
TGG
Pro
>WENV183437398
OMCD01006044
58120
Bacillota
AAG
Leu
>WENV183437454
OMCD01008206
398833
Bacillota
TGT
Thr
>WENV183437502
OMCD01011215
179176
Bacillota
ACG
Arg
>WENV183437514
OMCD01012575
298260
Bacillota
GTT
Asn
>WENV183437535
OMCD01014400
481217
Bacillota
GCA
Cys
>WENV183437568
OMCD01019392
175915
Bacillota
GTC
Asp
>WENV183437569
OMCD01019392
46835
Bacillota
TAA
Leu
>WENV183437591
OMCD01024220
280486
Bacillota
TGC
Ala
>WENV183437599
OMCD01025938
179166
Bacillota
TCT
Arg
>WENV183437612
OMCD01027336
184497
Bacillota
GGG
Pro
>WENV183437625
OMCD01030387
283367
Bacillota
GCC
Gly
>WENV183437629
OMCD01031830
186051
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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