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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183457277
OMDL01002937
510477
Bacillota
TCC
Gly
>WENV183456894
OMDL01000062
99852
Bacillota
GTA
Tyr
>WENV183457012
OMDL01000316
99852
Bacillota
GTA
Tyr
>WENV183457002
OMDL01000308
343590
Bacillota
GCC
Gly
>WENV183457347
OMDL01004097
234991
Bacillota
GAT
Ile
>WENV183457661
OMDL01028385
280500
Bacillota
TGC
Ala
>WENV183457172
OMDL01001617
349107
Bacillota
GCC
Gly
>WENV183457174
OMDL01001617
349107
Bacillota
GCC
Gly
>WENV183457285
OMDL01003022
349107
Bacillota
GCC
Gly
>WENV183457175
OMDL01001617
405363
Bacillota
GCA
Cys
>WENV183457171
OMDL01001617
280428
Bacillota
GAA
Phe
>WENV183457393
OMDL01005393
229015
Bacillota
GTG
His
>WENV183456921
OMDL01000123
280492
Bacillota
CTT
Lys
>WENV183457062
OMDL01000567
280492
Bacillota
CTT
Lys
>WENV183457264
OMDL01002692
175842
Bacillota
CAC
Val
>WENV183457409
OMDL01005702
175842
Bacillota
CAC
Val
>WENV183457234
OMDL01002273
175842
Bacillota
CAC
Val
>WENV183457473
OMDL01008324
236579
Bacillota
GAT
Ile
>WENV183457346
OMDL01004097
295166
Bacillota
TGC
Ala
>WENV183457472
OMDL01008324
295166
Bacillota
TGC
Ala
>WENV183457085
OMDL01000723
190476
Bacillota
CAT
Met
>WENV183457273
OMDL01002894
190476
Bacillota
CAT
Met
>WENV183456898
OMDL01000063
82124
Bacillota
TAA
Leu
>WENV183456870
OMDL01000025
73664
Bacillota
CAG
Leu
>WENV183456896
OMDL01000062
280447
Bacillota
GAC
Val
>WENV183457363
OMDL01004807
280447
Bacillota
GAC
Val
>WENV183457518
OMDL01010775
280447
Bacillota
GAC
Val
>WENV183456926
OMDL01000140
5692
Bacillota
GCT
Ser
>WENV183457186
OMDL01001815
186123
Bacillota
GTC
Asp
>WENV183456895
OMDL01000062
73009
Bacillota
CAG
Leu
>WENV183457373
OMDL01004908
73009
Bacillota
CAG
Leu
>WENV183457568
OMDL01015181
73009
Bacillota
CAG
Leu
>WENV183457640
OMDL01026092
481217
Bacillota
GCA
Cys
>WENV183457448
OMDL01006677
291581
Bacillota
CGG
Pro
>WENV183457019
OMDL01000350
175859
Bacillota
TCT
Arg
>WENV183457029
OMDL01000411
284627
Bacillota
GAA
Phe
>WENV183457688
OMDL01032708
346451
Bacillota
TTT
Lys
>WENV183457660
OMDL01028385
175916
Bacillota
GAT
Ile
>WENV183457004
OMDL01000311
480322
Bacillota
CTG
Gln
>WENV183457176
OMDL01001642
480322
Bacillota
CTG
Gln
>WENV183457344
OMDL01004058
480322
Bacillota
CTG
Gln
>WENV183457358
OMDL01004541
480322
Bacillota
CTG
Gln
>WENV183457415
OMDL01005819
480322
Bacillota
CTG
Gln
>WENV183457105
OMDL01000829
187364
Bacillota
CAT
Met
>WENV183457067
OMDL01000615
175868
Bacillota
GTT
Asn
>WENV183457159
OMDL01001430
175868
Bacillota
GTT
Asn
>WENV183457310
OMDL01003460
175868
Bacillota
GTT
Asn
>WENV183457658
OMDL01028344
314834
Bacillota
TGC
Ala
>WENV183457309
OMDL01003460
398854
Bacillota
CTC
Glu
>WENV183457053
OMDL01000497
291576
Bacillota
CCC
Gly
>WENV183457453
OMDL01007094
480324
Bacillota
TTG
Gln
>WENV183457617
OMDL01022186
497729
Bacillota
CCA
Trp
>WENV183456868
OMDL01000025
56079
Bacillota
AAG
Leu
>WENV183456869
OMDL01000025
56079
Bacillota
AAG
Leu
>WENV183457353
OMDL01004387
323864
Bacillota
TGC
Ala
>WENV183457632
OMDL01024287
186051
Bacillota
GAT
Ile
>WENV183456910
OMDL01000083
117745
Bacillota
GTA
Tyr
>WENV183457091
OMDL01000764
117745
Bacillota
GTA
Tyr
>WENV183457133
OMDL01001017
280444
Bacillota
GGT
Thr
>WENV183457211
OMDL01002074
280444
Bacillota
GGT
Thr
>WENV183457213
OMDL01002074
280444
Bacillota
GGT
Thr
>WENV183457282
OMDL01002948
280444
Bacillota
GGT
Thr
>WENV183457050
OMDL01000486
483485
Bacillota
CCC
Gly
>WENV183456998
OMDL01000301
179755
Bacillota
CCG
Arg
>WENV183457096
OMDL01000770
179755
Bacillota
CCG
Arg
>WENV183457300
OMDL01003285
179755
Bacillota
CCG
Arg
>WENV183457596
OMDL01018462
46835
Bacillota
TAA
Leu
>WENV183457086
OMDL01000723
398832
Bacillota
TTC
Glu
>WENV183457274
OMDL01002894
398832
Bacillota
TTC
Glu
>WENV183456897
OMDL01000063
118669
Bacillota
GTA
Tyr
>WENV183456871
OMDL01000026
280462
Bacillota
GAA
Phe
>WENV183457093
OMDL01000764
280462
Bacillota
GAA
Phe
>WENV183456867
OMDL01000024
398852
Bacillota
CTC
Glu
>WENV183456956
OMDL01000194
398852
Bacillota
CTC
Glu
>WENV183457071
OMDL01000627
398852
Bacillota
CTC
Glu
>WENV183457254
OMDL01002467
289123
Bacillota
GGT
Thr
>WENV183457385
OMDL01005145
280483
Bacillota
GAA
Phe
>WENV183457702
OMDL01038234
298260
Bacillota
GTT
Asn
>WENV183456962
OMDL01000196
175857
Bacillota
GTG
His
>WENV183457386
OMDL01005145
285756
Bacillota
GCC
Gly
>WENV183457088
OMDL01000746
398833
Bacillota
TGT
Thr
>WENV183457150
OMDL01001359
398833
Bacillota
TGT
Thr
>WENV183457173
OMDL01001617
175849
Bacillota
GTC
Asp
>WENV183457212
OMDL01002074
175849
Bacillota
GTC
Asp
>WENV183456964
OMDL01000196
280463
Bacillota
TTT
Lys
>WENV183457094
OMDL01000764
280463
Bacillota
TTT
Lys
>WENV183457187
OMDL01001815
405393
Bacillota
GCC
Gly
>WENV183457348
OMDL01004180
405393
Bacillota
GCC
Gly
>WENV183457370
OMDL01004862
56074
Bacillota
TGA
Ser
>WENV183457270
OMDL01002788
280473
Bacillota
TGG
Pro
>WENV183457519
OMDL01010810
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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